RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 LOXL1Q08397 574 aaPredicted RBP4.38□□□□□ -1.71
XRCC4-206ENST00000542685 ZNF816Q0VGE8 651 aaPredicted RBP4.38□□□□□ -1.71
XRCC4-206ENST00000542685 DEFB133Q30KQ1 61 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 C2orf82Q6UX34 121 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 MAPKAPK5-AS1Q8N8E1 139 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 FXYD5Q96DB9 178 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 UPK3BQ9BT76 320 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 CEP350Q5VT06 3117 aa4.38□□□□□ -1.71
XRCC4-206ENST00000542685 DYSFO75923 2080 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 TRGV5A0A0B4J1U4 118 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 ZNF815PA8K554 130 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 C17orf98A8MV24 154 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 NGFP01138 241 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV3-33P01772 117 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 COX6B1P14854 86 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 PRDX2P32119 198 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 CKS2P33552 79 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 CD164Q04900 197 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 PLGLAQ15195 96 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 MRPL51Q4U2R6 128 aaKnown RBP4.37□□□□□ -1.71
XRCC4-206ENST00000542685 C10orf113Q5VZT2 155 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 MDP1Q86V88 176 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 TDHQ8IZJ6 230 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 LYPD1Q8N2G4 141 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 FGFBP3Q8TAT2 258 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 FAM173AQ9BQD7 235 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 DPH3P1Q9H4G8 78 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM14BQ9NUH8 114 aa4.37□□□□□ -1.71
XRCC4-206ENST00000542685 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
XRCC4-206ENST00000542685 HEATR1Q9H583 2144 aaKnown RBP4.36□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV3-15A0A0B4J1V0 119 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 TRAV40A0A0B4J280 105 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 IGKV3D-20A0A0C4DH25 116 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 TEX49A0A1B0GTD5 131 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 FAM236DA0A1B0GTK5 79 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 hADV29S1A0JD25 119 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 IQCF6A8MYZ5 107 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM178BH3BS89 294 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 ENSAO43768 121 aaKnown RBP4.36□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV3-30P01768 117 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 INAFM2P0DMQ5 153 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV3-30-5P0DP03 117 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 FAM236CP0DP71 79 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 SLC25A29Q8N8R3 303 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 THAP8Q8NA92 274 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 UBALD1Q8TB05 177 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 FAM19A4Q96LR4 140 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM14CQ9P0S9 112 aa4.36□□□□□ -1.71
XRCC4-206ENST00000542685 KLK5Q9Y337 293 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-206ENST00000542685 A0A0J9YY99 117 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 LOC389332A0A1B0GUA5 103 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 CXCL13O43927 109 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 MRPL33O75394 65 aaKnown RBP4.35□□□□□ -1.71
XRCC4-206ENST00000542685 OXTP01178 125 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 CD24P25063 80 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 PRCDQ00LT1 54 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 LAGE3Q14657 143 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 ORMDL2Q53FV1 153 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 C3orf56Q8N813 242 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 SRSF12Q8WXF0 261 aaKnown RBP4.35□□□□□ -1.71
XRCC4-206ENST00000542685 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 TTTY13Q9BZ97 58 aa4.35□□□□□ -1.71
XRCC4-206ENST00000542685 COL27A1Q8IZC6 1860 aaPredicted RBP4.35□□□□□ -1.71
XRCC4-206ENST00000542685 ABCA7Q8IZY2 2146 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 MYO7AQ13402 2215 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 A0A0J9YX75 114 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 IGHV5-10-1A0A0J9YXX1 117 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 KNCNA6PVL3 124 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 C12orf77C9JDV5 145 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 IGHG2P01859 326 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 SYNJ2BPP57105 145 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 FAM222AQ5U5X8 452 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 Q6JHZ5 121 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 LINC00322Q6ZN03 302 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-206ENST00000542685 FAM19A1Q7Z5A9 133 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 EXOC3-AS1Q8N2X6 119 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 LINC00311Q8N616 119 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 TMEM263Q8WUH6 116 aaKnown RBP4.34□□□□□ -1.71
XRCC4-206ENST00000542685 DSCR8Q96T75 97 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
XRCC4-206ENST00000542685 TET2Q6N021 2002 aaPredicted RBP4.34□□□□□ -1.71
XRCC4-206ENST00000542685 SEC16AO15027 2179 aa4.34□□□□□ -1.72
XRCC4-206ENST00000542685 PDE4DIPQ5VU43 2346 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 ESPL1Q14674 2120 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 IGLV2-18A0A075B6J9 118 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 IGHV1-69DA0A0B4J2H0 117 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 LST1O00453 97 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 NDUFC1O43677 76 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 FSTL3O95633 263 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 CEMP1Q6PRD7 247 aaPredicted RBP4.33□□□□□ -1.72
XRCC4-206ENST00000542685 Q6ZS52 159 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 WDR86Q86TI4 376 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 S1PR3Q99500 378 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 Q9H3A6 140 aa4.33□□□□□ -1.72
XRCC4-206ENST00000542685 SLC25A15Q9Y619 301 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms