RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 SPINK4O60575 86 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GAGE7O76087 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 CXCL1P09341 107 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 ARMS2P0C7Q2 107 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GAGE12FP0CL80 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GAGE12GP0CL81 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GAGE12IP0CL82 117 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 DEFB130BP0DP73 79 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 DEFB130AP0DP74 79 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 GZMBP10144 247 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 NDUFA5Q16718 116 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 OR10G8Q8NGN5 311 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 C9orf85Q96MD7 179 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 IL36BQ9NZH7 164 aa8.27□□□□□ -1.09
YBX3-213ENST00000542641 TGP01266 2768 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 M0R2P5 195 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 NANOS2P60321 138 aaKnown RBP8.26□□□□□ -1.09
YBX3-213ENST00000542641 DAD1P61803 113 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 LGALS9BQ3B8N2 356 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 ZNF876PQ49A33 203 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 Q6ZTI0 123 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 MRPL16Q9NX20 251 aaKnown RBP8.26□□□□□ -1.09
YBX3-213ENST00000542641 PHLDA3Q9Y5J5 127 aa8.26□□□□□ -1.09
YBX3-213ENST00000542641 A8MWL6 223 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 C12orf74Q32Q52 190 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 CT83Q5H943 113 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 C10orf91Q5T1B1 145 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 RASL10AQ92737 203 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 TPPP3Q9BW30 176 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 SCRT2Q9NQ03 307 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 V9GYV3 84 aa8.25□□□□□ -1.09
YBX3-213ENST00000542641 TRGV2A0A075B6R0 118 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 TMEM238LA0A1B0GVL6 79 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 A0A1W2PPQ1 181 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 IGLC6P0CF74 106 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 SSTP61278 116 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 LINC00612Q8N6U2 182 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 FER1L6-AS1Q8NA97 138 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 SYT8Q8NBV8 401 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
YBX3-213ENST00000542641 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
YBX3-213ENST00000542641 CARHSP1Q9Y2V2 147 aaKnown RBP8.24□□□□□ -1.09
YBX3-213ENST00000542641 STAB2Q8WWQ8 2551 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 MUC21A0A0G2JKD1 596 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 MUC21A0A140T8X8 626 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 F2Z2F3 143 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 M0R381 172 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 PPP1R2P9O14990 202 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 SNAI2O43623 268 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 EIF4EBP3O60516 100 aaPredicted RBP8.23□□□□□ -1.09
YBX3-213ENST00000542641 MT-ND4LP03901 98 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 RNF212Q495C1 297 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 LYZL1Q6UWQ5 148 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 Q6ZTC4 211 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 ZFP82Q8N141 532 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 TSKUQ8WUA8 353 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 PTH2Q96A98 100 aa8.23□□□□□ -1.09
YBX3-213ENST00000542641 APOC3P02656 99 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 HTN3P15516 51 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 SPANXN1Q5VSR9 72 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 OR10AG1Q8NH19 301 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 ANAPC16Q96DE5 110 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 C18orf15Q96N68 181 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 NDUFAF3Q9BU61 184 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 GFRA4Q9GZZ7 299 aa8.22□□□□□ -1.09
YBX3-213ENST00000542641 FAM231BA6NCW3 169 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 HIGD1CA8MV81 97 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 ATP5G1P05496 136 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 CTRLP40313 264 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
YBX3-213ENST00000542641 CACNG7P62955 275 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 OR4C5Q8NGB2 326 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 PHLDA1Q8WV24 401 aaPredicted RBP8.21□□□□□ -1.1
YBX3-213ENST00000542641 PGLYRP4Q96LB8 373 aa8.21□□□□□ -1.1
YBX3-213ENST00000542641 TRAV10A0A0B4J240 114 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 A8MWV9 139 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 IGHV3-53P01767 116 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 SVBPQ8N300 66 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 MUC7Q8TAX7 377 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 BORCS7Q96B45 105 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 NAT8BQ9UHF3 227 aa8.2□□□□□ -1.1
YBX3-213ENST00000542641 DEFB131BA0A096LNP1 70 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 TRAV4A0A0B4J268 109 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 SMIM27A0A1W2PRY6 76 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 F5H768 121 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 RS1O15537 224 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 NXPH4O95158 308 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 NTF3P20783 257 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 CFAP126Q5VTH2 177 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 WDR73Q6P4I2 378 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 POM121L12Q8N7R1 296 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 CLRN3Q8NCR9 226 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 NUP35Q8NFH5 326 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 ZNF479Q96JC4 524 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
YBX3-213ENST00000542641 JPT2Q9H910 190 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms