RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 LINC00526Q96FQ7 95 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 ABCA1O95477 2261 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 C19orf71A6NCJ1 209 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 PRB1P04280 392 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 PRSS1P07477 247 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 PFN2P35080 140 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 CD69Q07108 199 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 CFAP126Q5VTH2 177 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 PHLDA1Q8WV24 401 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 TRBV25-1A0A075B6N4 114 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 SMKR1H3BMG3 65 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 IGHV4-39P01824 125 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 HBDP02042 147 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 SMCPP49901 116 aaPredicted RBP6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 LMO4P61968 165 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 VMA21Q3ZAQ7 101 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 CEND1Q8N111 149 aa6.18□□□□□ -1.42
PDLIM5-221ENST00000542407 RBAKDNA6NC62 111 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 TEX22C9J3V5 150 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 HOXB4P17483 251 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 RPL11P62913 178 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 DLX4Q92988 240 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 GFRA4Q9GZZ7 299 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 A0A0U1RQV1 116 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 TCRAP04437 139 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 C12orf74Q32Q52 190 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 VMO1Q7Z5L0 202 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 TEN1Q86WV5 123 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 AMN1Q8IY45 258 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 FMC1Q96HJ9 113 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 HIST1H4GQ99525 98 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 BPESC1Q9GZL8 116 aa6.17□□□□□ -1.42
PDLIM5-221ENST00000542407 IGHV3-21A0A0B4J1V1 117 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 TIMM23O14925 209 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 DYNAPQ8N1N2 210 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 Q9H3A6 140 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 ACACBO00763 2458 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 RNF5Q99942 180 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 ZNF492Q9P255 531 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 DPM3Q9P2X0 92 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 PEMTQ9UBM1 199 aa6.16□□□□□ -1.42
PDLIM5-221ENST00000542407 ERHP84090 104 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 RUSC1-AS1Q66K80 236 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 ZNF843Q8N446 348 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 MRPL53Q96EL3 112 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 PSMG3-AS1Q96PY0 264 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 U3KQE9 123 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 TACC2O95359 2948 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 OVOL1O14753 267 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 ELANEP08246 267 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 MYCNOSP40205 109 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 CD164Q04900 197 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 PLEKHB2Q96CS7 222 aa6.15□□□□□ -1.42
PDLIM5-221ENST00000542407 SVEP1Q4LDE5 3571 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 ARHGAP32A7KAX9 2087 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 LOC107984156A0A0G2JMH3 177 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 NDUFA3O95167 84 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 APELAP0DMC3 54 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 CKS2P33552 79 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 PSMB2P49721 201 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 ARL17AQ8IVW1 177 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 ORMDL3Q8N138 153 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 NPBQ8NG41 125 aa6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 TPRP12270 2363 aaKnown RBP6.15□□□□□ -1.43
PDLIM5-221ENST00000542407 SPTBN1Q01082 2364 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 IGKV1D-37A0A075B6S9 117 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 RRN3P1Q2M238 152 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 Q86TA4 180 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 Q8N6K4 173 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 FOXC2Q99958 501 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 COL12A1Q99715 3063 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 DOPEY1Q5JWR5 2465 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 LGALS1P09382 135 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 RPL27AP46776 148 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 KLF17Q5JT82 389 aaPredicted RBP6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 MAPKAPK5-AS1Q8N8E1 139 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 MDFIQ99750 246 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 HIGD1BQ9P298 99 aa6.14□□□□□ -1.43
PDLIM5-221ENST00000542407 FLNCQ14315 2725 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 NAV3Q8IVL0 2385 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 AGRNO00468 2067 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 H3BVH4 76 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 IGKCP01834 107 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 LEPP41159 167 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 MINOS1Q5TGZ0 78 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 LINC00482Q8N8I6 264 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 THAP8Q8NA92 274 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 FAM19A4Q96LR4 140 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 CCL19Q99731 98 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 MINOS1-NBL1R4GNA1 71 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 UBR5O95071 2799 aaPredicted RBP6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 A0A087WWL8 130 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 WI2-2373I1.2A0A1W2PRP0 233 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 DPM2O94777 84 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 NPYP01303 97 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 CD7P09564 240 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 TMEM258P61165 79 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 EBI3Q14213 229 aa6.13□□□□□ -1.43
PDLIM5-221ENST00000542407 LYZL1Q6UWQ5 148 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms