RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 NXT2Q9NPJ8 142 aaKnown RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 NHP2Q9NX24 153 aaKnown RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 RBM12B-AS1Q9P1G2 102 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 EPDR1Q9UM22 224 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 HHLA3Q9XRX5 114 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 KLK5Q9Y337 293 aaPredicted RBP2.16□□□□□ -2.06
USP28-210ENST00000542033 OBSL1O75147 1896 aa2.16□□□□□ -2.06
USP28-210ENST00000542033 ZNF831Q5JPB2 1677 aa2.15□□□□□ -2.06
USP28-210ENST00000542033 CXorf51AA0A1B0GTR3 108 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 hADV29S1A0JD25 119 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 PINLYPA6NC86 204 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 C17orf51A8MQB3 221 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 C11orf94C9JXX5 98 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 UBE2L6O14933 153 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 SLC25A20O43772 301 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 SS18L1O75177 396 aaPredicted RBP2.15□□□□□ -2.07
USP28-210ENST00000542033 EPPINO95925 133 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 HBDP02042 147 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 HMGN2P05204 90 aaKnown RBP2.15□□□□□ -2.07
USP28-210ENST00000542033 ZNF823P16415 610 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 DYNLT3P51808 116 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 ZNF136P52737 540 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 PCBD1P61457 104 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 RPL18Q07020 188 aaKnown RBP2.15□□□□□ -2.07
USP28-210ENST00000542033 SP6Q3SY56 376 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 FAM104BQ5XKR9 115 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 WDR86Q86TI4 376 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 PCP2Q8IVA1 136 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 WFDC11Q8NEX6 87 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 KLK6Q92876 244 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 Q96M85 177 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 CXCL16Q9H2A7 254 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 DEC1Q9P2X7 70 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 V9GYV3 84 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 NLRC5Q86WI3 1866 aa2.15□□□□□ -2.07
USP28-210ENST00000542033 IGLV3-16A0A075B6K0 115 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 TRBV25-1A0A075B6N4 114 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 IGHV3-74A0A0B4J1X5 117 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 IGHV3OR16-9A0A0B4J2B5 98 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 A0A0D9SEW6 157 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 TRBV27A0A0K0K1C4 114 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 TRBV10-2A0A0K0K1G8 114 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 C19orf71A6NCJ1 209 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 C8orf87E5RJ46 101 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 H3BMM0 161 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 J3QT63 122 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 RTL8CO15255 209 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 ZNF861PO60384 105 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 IGKV1D-16P01601 117 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 IGLV2-23P01705 113 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 IFI6P09912 130 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 PSMB2P49721 201 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 UBE2D1P51668 147 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 EFNA4P52798 201 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 HBBP68871 147 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 ZNF56Q15929 161 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 TMEM155Q4W5P6 130 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 CENPWQ5EE01 88 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 LCE3AQ5TA76 89 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 MIC13Q5XKP0 118 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 ZFP2Q6ZN57 461 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 FP248Q71RG6 208 aaPredicted RBP2.14□□□□□ -2.07
USP28-210ENST00000542033 PHF5AQ7RTV0 110 aaKnown RBP2.14□□□□□ -2.07
USP28-210ENST00000542033 NDUFA11Q86Y39 141 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 MKXQ8IYA7 352 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 RPRMLQ8N4K4 120 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 C3orf56Q8N813 242 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 C10orf105Q8TEF2 133 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 UBE2WQ96B02 151 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 TAS2R4Q9NYW5 299 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 ZNF492Q9P255 531 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 R4GMQ9 66 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 NUMA1Q14980 2115 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 MED12LQ86YW9 2145 aa2.14□□□□□ -2.07
USP28-210ENST00000542033 SCN3AQ9NY46 2000 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 COL16A1Q07092 1604 aaPredicted RBP2.13□□□□□ -2.07
USP28-210ENST00000542033 COL4A4P53420 1690 aaPredicted RBP2.13□□□□□ -2.07
USP28-210ENST00000542033 EXPH5Q8NEV8 1989 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 IGLV11-55A0A075B6I3 123 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 TRBV7-3A0A075B6L6 115 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 A0A1B0GWA3 101 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 A0A1B0GXF2 115 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 TMEM14DPA8MWL7 114 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 IL9P15248 144 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 UBE2AP49459 152 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 CCL23P55773 120 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 SYNJ2BPP57105 145 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 SNRPD3P62318 126 aaKnown RBP2.13□□□□□ -2.07
USP28-210ENST00000542033 ATXN8Q156A1 80 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 ORMDL2Q53FV1 153 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 LINC01590Q5TEZ4 76 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 LYZL2Q7Z4W2 148 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 RPP25LQ8N5L8 163 aaKnown RBP2.13□□□□□ -2.07
USP28-210ENST00000542033 C11orf72Q8NBR9 251 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 PFN4Q8NHR9 129 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 RNF185Q96GF1 192 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 METTL26Q96S19 204 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 WFDC6Q9BQY6 131 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 TTTY10Q9BZA0 68 aa2.13□□□□□ -2.07
USP28-210ENST00000542033 TRAV3A0A0B4J244 114 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms