RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 GAGE4Q13068 117 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 GAGE5Q13069 117 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 LINC01620Q4KN68 170 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 GAGE13Q4V321 117 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 ZNF506Q5JVG8 444 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 MZT2BQ6NZ67 158 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 CYB561D1Q8N8Q1 229 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 OR10G9Q8NGN4 311 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 CIRBP-AS1Q8TBR5 109 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 C9orf85Q96MD7 179 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 RBM38Q9H0Z9 239 aaKnown RBP8.05□□□□□ -1.12
SNHG1-216ENST00000541416 OR5AC2Q9NZP5 309 aa8.05□□□□□ -1.12
SNHG1-216ENST00000541416 A0A087WX48 190 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 PGPEP1LA6NFU8 196 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 GCGP01275 180 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 PET100P0DJ07 73 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 S100A4P26447 101 aaKnown RBP8.04□□□□□ -1.12
SNHG1-216ENST00000541416 SMUG1Q53HV7 270 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 PIK3CD-AS1Q5SR53 167 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 Q8N3U1 123 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 TVP23CQ96ET8 276 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 PKHD1L1Q86WI1 4243 aa8.04□□□□□ -1.12
SNHG1-216ENST00000541416 IGLV2-11P01706 119 aa8.03□□□□□ -1.12
SNHG1-216ENST00000541416 RPL37AP61513 92 aaKnown RBP8.03□□□□□ -1.12
SNHG1-216ENST00000541416 Q0VG73 95 aa8.03□□□□□ -1.12
SNHG1-216ENST00000541416 LGALSLQ3ZCW2 172 aaPredicted RBP8.03□□□□□ -1.12
SNHG1-216ENST00000541416 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
SNHG1-216ENST00000541416 CHCHD7Q9BUK0 85 aa8.03□□□□□ -1.12
SNHG1-216ENST00000541416 CCDC32Q9BV29 185 aa8.03□□□□□ -1.12
SNHG1-216ENST00000541416 RHODO00212 210 aa8.02□□□□□ -1.13
SNHG1-216ENST00000541416 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
SNHG1-216ENST00000541416 GNG5P63218 68 aa8.02□□□□□ -1.13
SNHG1-216ENST00000541416 PARLQ9H300 379 aa8.02□□□□□ -1.13
SNHG1-216ENST00000541416 KLK12Q9UKR0 248 aa8.02□□□□□ -1.13
SNHG1-216ENST00000541416 SIX6O95475 246 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 TCRAP04437 139 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 LINC00694P0DN24 101 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 SAPCD1Q5SSQ6 148 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 NIT1Q86X76 327 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 OR2T35Q8NGX2 323 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 UBE2WQ96B02 151 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 SGK494Q96LW2 274 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 PSG8Q9UQ74 426 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 HSPB11Q9Y547 144 aa8.01□□□□□ -1.13
SNHG1-216ENST00000541416 H0YIZ8 118 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
SNHG1-216ENST00000541416 ASIPP42127 132 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 ZNF80P51504 273 aaPredicted RBP8□□□□□ -1.13
SNHG1-216ENST00000541416 FLI1Q01543 452 aaPredicted RBP8□□□□□ -1.13
SNHG1-216ENST00000541416 PPP1R1CQ8WVI7 109 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 LINC00479Q96M42 142 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
SNHG1-216ENST00000541416 CRPP02741 224 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 RPL12P30050 165 aaKnown RBP7.99□□□□□ -1.13
SNHG1-216ENST00000541416 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 PRNTQ86SH4 94 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 TMEM75Q8N9X5 138 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 OR10G7Q8NGN6 311 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 OR2G3Q8NGZ4 309 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 ENKURQ8TC29 256 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
SNHG1-216ENST00000541416 EIF3GO75821 320 aaKnown RBP eCLIP7.98□□□□□ -1.13
SNHG1-216ENST00000541416 ARL14EPLP0DKL9 152 aa7.98□□□□□ -1.13
SNHG1-216ENST00000541416 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
SNHG1-216ENST00000541416 ATRAIDQ6UW56 229 aa7.98□□□□□ -1.13
SNHG1-216ENST00000541416 SAMD10Q9BYL1 202 aa7.98□□□□□ -1.13
SNHG1-216ENST00000541416 IL36BQ9NZH7 164 aa7.98□□□□□ -1.13
SNHG1-216ENST00000541416 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 TMEM262E9PQX1 116 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 HMGB3O15347 200 aaKnown RBP7.97□□□□□ -1.13
SNHG1-216ENST00000541416 MPC2O95563 127 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 RAB2AP61019 212 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 PKIAP61925 76 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 C14orf178Q8N769 122 aaPredicted RBP7.97□□□□□ -1.13
SNHG1-216ENST00000541416 TMEM167BQ9NRX6 74 aa7.97□□□□□ -1.13
SNHG1-216ENST00000541416 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
SNHG1-216ENST00000541416 SUMO1P63165 101 aaKnown RBP7.96□□□□□ -1.14
SNHG1-216ENST00000541416 RPL36AP83881 106 aaKnown RBP7.96□□□□□ -1.14
SNHG1-216ENST00000541416 FAM74A4Q5TZK3 123 aa7.96□□□□□ -1.14
SNHG1-216ENST00000541416 DGAT2L7PQ6IED9 249 aa7.96□□□□□ -1.14
SNHG1-216ENST00000541416 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.96□□□□□ -1.14
SNHG1-216ENST00000541416 OR11H4Q8NGC9 324 aa7.96□□□□□ -1.14
SNHG1-216ENST00000541416 RPL36ALQ969Q0 106 aaKnown RBP7.96□□□□□ -1.14
SNHG1-216ENST00000541416 EPDR1Q9UM22 224 aa7.96□□□□□ -1.14
SNHG1-216ENST00000541416 IGKV3D-20A0A0C4DH25 116 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 A0A0D9SG52 128 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 B4DEV8 164 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 MBP02144 154 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 GCHFRP30047 84 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 UFSP1Q6NVU6 142 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 HSD17B11Q8NBQ5 300 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 ZC2HC1AQ96GY0 325 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
SNHG1-216ENST00000541416 H3BVH4 76 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 SSNA1O43805 119 aa7.94□□□□□ -1.14
SNHG1-216ENST00000541416 CXorf1O96002 111 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms