RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 OR10D4PQ8NGN7 298 aa4.97□□□□□ -1.61
YBX3-209ENST00000540747 PFDN5Q99471 154 aa4.97□□□□□ -1.61
YBX3-209ENST00000540747 MGST2Q99735 147 aa4.97□□□□□ -1.61
YBX3-209ENST00000540747 PYGO2Q9BRQ0 406 aa4.97□□□□□ -1.61
YBX3-209ENST00000540747 SLC17A3O00476 420 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 SIVA1O15304 175 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 NXPH4O95158 308 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 NDUFB4O95168 129 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 LINC00869P0C866 280 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 ARL14EPLP0DKL9 152 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 GCHFRP30047 84 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 ERVFC1-1P60608 527 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 SELENOTP62341 195 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 RPL19P84098 196 aaKnown RBP4.96□□□□□ -1.62
YBX3-209ENST00000540747 GCSAMLQ5JQS6 135 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 HIST3H2BBQ8N257 126 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 OR10G8Q8NGN5 311 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 ODF3Q96PU9 254 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 IMMP2LQ96T52 175 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 GSN-AS1Q9NRJ2 163 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 TMEM167BQ9NRX6 74 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
YBX3-209ENST00000540747 XKRY2A2RUG3 117 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 NPIPB6E9PJ23 425 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 CT45A10P0DMU9 189 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 IGLC2P0DOY2 106 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 FABP4P15090 132 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 TAS2R45P59539 299 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 PDZD11Q5EBL8 140 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 DNLZQ5SXM8 178 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 TMEM37Q8WXS4 190 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 LINC00467Q9BRT7 94 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 SLC50A1Q9BRV3 221 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 PPP1R14DQ9NXH3 145 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 MDFICQ9P1T7 246 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 FUT9Q9Y231 359 aa4.95□□□□□ -1.62
YBX3-209ENST00000540747 SNURFLB1AK76 121 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 ZNF324O75467 553 aaPredicted RBP4.94□□□□□ -1.62
YBX3-209ENST00000540747 SMR3BP02814 79 aaPredicted RBP4.94□□□□□ -1.62
YBX3-209ENST00000540747 TYMSP04818 313 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 OR5G3P0C626 314 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 CTAG1AP78358 180 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 MORN5Q5VZ52 161 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 LINC01551Q86U37 167 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 TMEM183AQ8IXX5 376 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 FAM19A4Q96LR4 140 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 TRAPPC1Q9Y5R8 145 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 LY96Q9Y6Y9 160 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 ARL2-SNX15V9GYD0 113 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 PKHD1L1Q86WI1 4243 aa4.94□□□□□ -1.62
YBX3-209ENST00000540747 TRAV9-1A0A075B6T8 112 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 TRAV12-3A0A0B4J271 114 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 SCO2A0A1W2PP80 73 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 IFITM10A6NMD0 228 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 LINC00587B1AMM8 73 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 KLLNB2CW77 178 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 EREGO14944 169 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 SPINK4O60575 86 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 LEPP41159 167 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 ANXA2RQ3ZCQ2 193 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 LYPD5Q6UWN5 251 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 PQLC2Q6ZP29 291 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 MIR17HGQ75NE6 70 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 NFE4Q86UQ8 179 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 OR1L4Q8NGR5 311 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 TMEM18Q96B42 140 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 PACRGQ96M98 296 aaPredicted RBP4.93□□□□□ -1.62
YBX3-209ENST00000540747 TMEM70Q9BUB7 260 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 MRPL32Q9BYC8 188 aaKnown RBP4.93□□□□□ -1.62
YBX3-209ENST00000540747 DNAJC4Q9NNZ3 241 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 ICOSQ9Y6W8 199 aa4.93□□□□□ -1.62
YBX3-209ENST00000540747 LRCOL1A6NCL2 159 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 KRTAP29-1A8MX34 341 aaPredicted RBP4.92□□□□□ -1.62
YBX3-209ENST00000540747 C9JCJ5 164 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 H3BTX0 84 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 K7EP13 123 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 PHOX2AO14813 284 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 COX7A2P2O60397 106 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 OR7C2O60412 319 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 SNRPCP09234 159 aaKnown RBP4.92□□□□□ -1.62
YBX3-209ENST00000540747 GCSHP23434 173 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 GNG4P50150 75 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 TCL1AP56279 114 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 HAMPP81172 84 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 COX19Q49B96 90 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 PYY3Q5JQD4 70 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 COA6Q5JTJ3 125 aaKnown RBP4.92□□□□□ -1.62
YBX3-209ENST00000540747 Q6ZSN1 163 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 LINC00305Q7Z4B0 112 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 S100A7AQ86SG5 101 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 BPIFA4PQ86YQ2 179 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 C11orf52Q96A22 123 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 HIST1H2BLQ99880 126 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 VGLL1Q99990 258 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 DERL1Q9BUN8 251 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 IL36BQ9NZH7 164 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 MSRB1Q9NZV6 116 aa4.92□□□□□ -1.62
YBX3-209ENST00000540747 RNF24Q9Y225 148 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms