RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 GAGE4Q13068 117 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 GAGE5Q13069 117 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 LAGE3Q14657 143 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 BAALCQ8WXS3 180 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 NDFIP1Q9BT67 221 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 JPT2Q9H910 190 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 NDUFA13Q9P0J0 144 aa9.39□□□□□ -0.91
SEMA4D-222ENST00000540183 TAAR5O14804 337 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 SSNA1O43805 119 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 PLA2G1BP04054 148 aaKnown RBP9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 LINC00694P0DN24 101 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 PRNTQ86SH4 94 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 S100ZQ8WXG8 99 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 SAMD10Q9BYL1 202 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 PARLQ9H300 379 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 UBR4Q5T4S7 5183 aa9.38□□□□□ -0.91
SEMA4D-222ENST00000540183 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 MGST1P10620 155 aaKnown RBP9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 CDC34P49427 236 aaPredicted RBP9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 C5orf17Q8NAS9 161 aa9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 OR2T35Q8NGX2 323 aa9.37□□□□□ -0.91
SEMA4D-222ENST00000540183 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 CIDEAO60543 219 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 STAG3L2P0CL84 134 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 PET100P0DJ07 73 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 GCHFRP30047 84 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 SMUG1Q53HV7 270 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 PTH2Q96A98 100 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 LINC00479Q96M42 142 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 MARVELD1Q9BSK0 173 aa9.36□□□□□ -0.91
SEMA4D-222ENST00000540183 TRAV34A0A0B4J273 112 aa9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 LGALSLQ3ZCW2 172 aaPredicted RBP9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 HSD17B11Q8NBQ5 300 aa9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 RAB24Q969Q5 203 aa9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
SEMA4D-222ENST00000540183 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
SEMA4D-222ENST00000540183 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
SEMA4D-222ENST00000540183 UFSP1Q6NVU6 142 aa9.34□□□□□ -0.91
SEMA4D-222ENST00000540183 DEFB104AQ8WTQ1 72 aa9.34□□□□□ -0.91
SEMA4D-222ENST00000540183 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
SEMA4D-222ENST00000540183 ZFP69Q49AA0 526 aa9.33□□□□□ -0.92
SEMA4D-222ENST00000540183 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
SEMA4D-222ENST00000540183 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
SEMA4D-222ENST00000540183 CYB561D1Q8N8Q1 229 aa9.33□□□□□ -0.92
SEMA4D-222ENST00000540183 SH3BGRL3Q9H299 93 aa9.33□□□□□ -0.92
SEMA4D-222ENST00000540183 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 A8MWV9 139 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 H3BVH4 76 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 K7EQM0 130 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 ATP6V0CP27449 155 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 DMRTA1Q5VZB9 504 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 OR2G3Q8NGZ4 309 aa9.32□□□□□ -0.92
SEMA4D-222ENST00000540183 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
SEMA4D-222ENST00000540183 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
SEMA4D-222ENST00000540183 ARL2-SNX15V9GYD0 113 aa9.31□□□□□ -0.92
SEMA4D-222ENST00000540183 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 RNF222A6NCQ9 220 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 ASIPP42127 132 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 TOR2AQ5JU69 321 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 NIT1Q86X76 327 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 CIRBP-AS1Q8TBR5 109 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 CHAC1Q9BUX1 264 aa9.3□□□□□ -0.92
SEMA4D-222ENST00000540183 A0A087WWL8 130 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 B4DEV8 164 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 M0R036 132 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 CXorf1O96002 111 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 CRIP1P50238 77 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 UBE2G2P60604 165 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 SAPCD1Q5SSQ6 148 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 FAM74A4Q5TZK3 123 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 Q86TA4 180 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 PSMG3Q9BT73 122 aaPredicted RBP9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 TMEM167BQ9NRX6 74 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
SEMA4D-222ENST00000540183 A0A087WWC5 75 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 FABP5P3A8MUU1 101 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 FGF8P55075 233 aaPredicted RBP9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 Q8N976 141 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 ZC2HC1AQ96GY0 325 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 ALG5Q9Y673 324 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 URGCP-MRPS24S4R325 110 aa9.28□□□□□ -0.92
SEMA4D-222ENST00000540183 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
SEMA4D-222ENST00000540183 Q5BKY6 102 aa9.27□□□□□ -0.93
SEMA4D-222ENST00000540183 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
SEMA4D-222ENST00000540183 RMI2Q96E14 147 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms