RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
USB1-203ENST00000539737 PDE6DO43924 150 aa10.35□□□□□ -0.75
USB1-203ENST00000539737 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
USB1-203ENST00000539737 MDFICQ9P1T7 246 aa10.35□□□□□ -0.75
USB1-203ENST00000539737 IGHV3-16A0A0C4DH30 117 aa10.34□□□□□ -0.75
USB1-203ENST00000539737 FABP5P3A8MUU1 101 aa10.34□□□□□ -0.75
USB1-203ENST00000539737 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
USB1-203ENST00000539737 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
USB1-203ENST00000539737 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
USB1-203ENST00000539737 VPS13BQ7Z7G8 4022 aa10.33□□□□□ -0.76
USB1-203ENST00000539737 TRAV26-1A0A087WT03 109 aa10.33□□□□□ -0.76
USB1-203ENST00000539737 C11orf21Q9P2W6 132 aa10.33□□□□□ -0.76
USB1-203ENST00000539737 VAX2Q9UIW0 290 aa10.33□□□□□ -0.76
USB1-203ENST00000539737 A0A0J9YY99 117 aa10.32□□□□□ -0.76
USB1-203ENST00000539737 M0R2P5 195 aa10.32□□□□□ -0.76
USB1-203ENST00000539737 GNRH2O43555 120 aa10.32□□□□□ -0.76
USB1-203ENST00000539737 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
USB1-203ENST00000539737 H3BNG1 76 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 SH2D1AO60880 128 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 ZNF674Q2M3X9 581 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 TTC32Q5I0X7 151 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 BAGE2Q86Y30 109 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 LYPD6BQ8NI32 183 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 RASL10AQ92737 203 aa10.31□□□□□ -0.76
USB1-203ENST00000539737 B4DEV8 164 aa10.3□□□□□ -0.76
USB1-203ENST00000539737 ORM1P02763 201 aa10.3□□□□□ -0.76
USB1-203ENST00000539737 ASIPP42127 132 aa10.3□□□□□ -0.76
USB1-203ENST00000539737 NHLRC2Q8NBF2 726 aa10.3□□□□□ -0.76
USB1-203ENST00000539737 Q9H8V8 135 aa10.3□□□□□ -0.76
USB1-203ENST00000539737 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 EPM2AB3EWF7 344 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 INAFM2P0DMQ5 153 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 HOXA5P20719 270 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 S100A4P26447 101 aaKnown RBP10.29□□□□□ -0.76
USB1-203ENST00000539737 CRIP1P50238 77 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 HAMPP81172 84 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 DERL1Q9BUN8 251 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 MLST8Q9BVC4 326 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 MED9Q9NWA0 146 aa10.29□□□□□ -0.76
USB1-203ENST00000539737 M0R036 132 aa10.28□□□□□ -0.76
USB1-203ENST00000539737 GNG4P50150 75 aa10.28□□□□□ -0.76
USB1-203ENST00000539737 SLAQ13239 276 aa10.28□□□□□ -0.76
USB1-203ENST00000539737 TNFRSF18Q9Y5U5 241 aa10.28□□□□□ -0.76
USB1-203ENST00000539737 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 KRBOX1C9JBD0 128 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 IGHV3-53P01767 116 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 ESRGQ1W209 222 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 ZNF506Q5JVG8 444 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 DNLZQ5SXM8 178 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 TEX261Q6UWH6 196 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 PTH2Q96A98 100 aa10.27□□□□□ -0.77
USB1-203ENST00000539737 TMEM250H0YL14 139 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 RNASE3P12724 160 aaKnown RBP10.26□□□□□ -0.77
USB1-203ENST00000539737 ZNF876PQ49A33 203 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 PRR27Q6MZM9 219 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 OR4C5Q8NGB2 326 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 BIN3Q9NQY0 253 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
USB1-203ENST00000539737 TRGV4A0A0C4DH28 118 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 C9JCJ5 164 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 H3BVH4 76 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 PAX4O43316 350 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 NDUFS6O75380 124 aaKnown RBP10.25□□□□□ -0.77
USB1-203ENST00000539737 CXCL1P09341 107 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 XGP55808 180 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 LINC00315P59091 139 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 TOR2AQ5JU69 321 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 PIK3CD-AS1Q5SR53 167 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 PRO0255Q9UI72 69 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
USB1-203ENST00000539737 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
USB1-203ENST00000539737 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 A0A1W2PPQ1 181 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 CIDEAO60543 219 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 MGST1P10620 155 aaKnown RBP10.24□□□□□ -0.77
USB1-203ENST00000539737 Q5VSD8 79 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 SYT8Q8NBV8 401 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 FAM210AQ96ND0 272 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
USB1-203ENST00000539737 EIF5A2Q9GZV4 153 aaKnown RBP10.24□□□□□ -0.77
USB1-203ENST00000539737 RAB19A4D1S5 217 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
USB1-203ENST00000539737 SFTA3P0C7M3 94 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 BTF3P20290 206 aaKnown RBP10.23□□□□□ -0.77
USB1-203ENST00000539737 FHL2Q14192 279 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
USB1-203ENST00000539737 DAZAP1Q96EP5 407 aaKnown RBP10.23□□□□□ -0.77
USB1-203ENST00000539737 ZNF479Q96JC4 524 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 HHLA3Q9XRX5 114 aa10.23□□□□□ -0.77
USB1-203ENST00000539737 TRBV20OR9-2A0A075B6H5 130 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 PGPEP1LA6NFU8 196 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 RS1O15537 224 aa10.22□□□□□ -0.77
USB1-203ENST00000539737 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms