RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 IL15RAQ13261 267 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 SLC25A29Q8N8R3 303 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 IGLV11-55A0A075B6I3 123 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 I3L2K1 104 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 C5orf56Q8N8D9 126 aa5.08□□□□□ -1.6
LSAMP-207ENST00000539563 C9orf153Q5TBE3 101 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 IGHV7-81A0A0B4J1V7 117 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 BUB3O43684 328 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 CRLF1O75462 422 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 MORN5Q5VZ52 161 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 TMEM89A2RUT3 159 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 IGHG4P01861 327 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 AGPAT4-IT1Q9H0P7 198 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 SZT2Q5T011 3432 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 K7EP34 96 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 EP300Q09472 2414 aaPredicted RBP5.07□□□□□ -1.6
LSAMP-207ENST00000539563 BPTFQ12830 3046 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 ATG2AQ2TAZ0 1938 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 K7EMT4 169 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 SPART-AS1P0CW21 52 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 Q6ZVH6 145 aa5.07□□□□□ -1.6
LSAMP-207ENST00000539563 NXPH4O95158 308 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 SPANXCQ9NY87 97 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 CGB7P0DN87 165 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 IFITM1P13164 125 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 DAZAP2Q15038 168 aaPredicted RBP5.06□□□□□ -1.6
LSAMP-207ENST00000539563 ICOSQ9Y6W8 199 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 IGKV2D-24A0A075B6R9 120 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 K7EIM0 57 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 MRPL23Q16540 153 aaKnown RBP5.06□□□□□ -1.6
LSAMP-207ENST00000539563 Q71RC1 249 aaPredicted RBP5.06□□□□□ -1.6
LSAMP-207ENST00000539563 Q8N9W7 124 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 DKK2Q9UBU2 259 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 XCL1P47992 114 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 C12orf74Q32Q52 190 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 CLPSL2Q6UWE3 100 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 IGHV4-30-2A0A087WSY4 118 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 IGHV4-61A0A0C4DH41 118 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 WI2-2373I1.2A0A1W2PRP0 233 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 ZNF747Q9BV97 191 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 DKK4Q9UBT3 224 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 CHD9Q3L8U1 2897 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 K7EQD1 137 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 ANKRD29Q8N6D5 301 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 CITED1Q99966 193 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 K7EP13 123 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 MED14OSP0DP75 135 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 WT1P19544 449 aaPredicted RBP5.06□□□□□ -1.6
LSAMP-207ENST00000539563 SLURP1P55000 103 aa5.06□□□□□ -1.6
LSAMP-207ENST00000539563 WIPF3A6NGB9 483 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 A0A096LPF7 62 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 IGHV4-38-2P0DP08 117 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 GP9P14770 177 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 HAMPP81172 84 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 C9orf47Q6ZRZ4 202 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 AJUBAQ96IF1 538 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 C1orf43Q9BWL3 253 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 FGF23Q9GZV9 251 aaPredicted RBP5.05□□□□□ -1.6
LSAMP-207ENST00000539563 CRYGCP07315 174 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 ORMDL1Q9P0S3 153 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 MYO15AQ9UKN7 3530 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.05□□□□□ -1.6
LSAMP-207ENST00000539563 IGKV2-29A2NJV5 120 aaPredicted RBP5.05□□□□□ -1.6
LSAMP-207ENST00000539563 SPRNQ5BIV9 151 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 C10orf105Q8TEF2 133 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 CARD19Q96LW7 228 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 IGKV1OR2-108A0A075B7D4 117 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 GRNP28799 593 aaKnown RBP5.05□□□□□ -1.6
LSAMP-207ENST00000539563 CCL18P55774 89 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 UBE2BP63146 152 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 LURAP1LQ8IV03 231 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 SPTAN1Q13813 2472 aaKnown RBP5.05□□□□□ -1.6
LSAMP-207ENST00000539563 CPAMD8Q8IZJ3 1885 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 F6UB75 175 aa5.05□□□□□ -1.6
LSAMP-207ENST00000539563 GPHB5Q86YW7 130 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 COX7A2LO14548 114 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 TRACP01848 142 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 ACYP1P07311 99 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 RNASE13Q5GAN3 156 aaKnown RBP5.04□□□□□ -1.6
LSAMP-207ENST00000539563 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 FBXL19-AS1Q494R0 122 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 APRG1Q8IVJ8 170 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 Q9H8V8 135 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 DEFB136Q30KP8 78 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 LRP4O75096 1905 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 A0A0J9YY99 117 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 C2orf70A6NJV1 201 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 GYPEP15421 78 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 C4orf3Q8WVX3 66 aa5.04□□□□□ -1.6
LSAMP-207ENST00000539563 MRPL36Q9P0J6 103 aaKnown RBP5.04□□□□□ -1.6
LSAMP-207ENST00000539563 TRBV6-1A0A0K0K1D8 114 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 CFC1BP0CG36 223 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 CFC1P0CG37 223 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 RITA1Q96K30 269 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 BAALC-AS2P0C853 105 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 TRBV7-3A0A075B6L6 115 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 hADV29S1A0JD25 119 aa5.03□□□□□ -1.6
LSAMP-207ENST00000539563 MRAPQ8TCY5 172 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms