RNA–Protein interactions for RNA: ENST00000539267.5

MFSD4A-208, Transcript of major facilitator superfamily domain containing 4A, human

TSL 2

Gene MFSD4A, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD4A-208	ENST00000539267	SIGLEC8	Q9NYZ4	499 aa		13.77	□□□□□ -0.21
MFSD4A-208	ENST00000539267	WNK1	Q9H4A3	2382 aa		13.77	□□□□□ -0.21
MFSD4A-208	ENST00000539267	IGHV4-4	A0A075B6R2	117 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	GNRH2	O43555	120 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	CHCHD1	Q96BP2	118 aa	Known RBP	13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	PRELID3A	Q96N28	172 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	TRAV25	A0A0B4J276	109 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	LINC00614	P0C842	121 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	HLA-DRB4	P13762	266 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	RAB4A	P20338	218 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	RNF185	Q96GF1	192 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	MAP6D1	Q9H9H5	199 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	HLA-DRB4	X5D2U9	266 aa		13.76	□□□□□ -0.21
MFSD4A-208	ENST00000539267	MED14OS	P0DP75	135 aa		13.75	□□□□□ -0.21
MFSD4A-208	ENST00000539267	EVI2A	P22794	236 aa		13.75	□□□□□ -0.21
MFSD4A-208	ENST00000539267	AMTN	Q6UX39	209 aa		13.75	□□□□□ -0.21
MFSD4A-208	ENST00000539267	PHLDA3	Q9Y5J5	127 aa		13.75	□□□□□ -0.21
MFSD4A-208	ENST00000539267		M0R381	172 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	SCGB1D1	O95968	90 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	DDT	P30046	118 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	C14orf144	Q96I85	54 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	SMKR1	H3BMG3	65 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267	ZNF124	Q15973	351 aa		13.74	□□□□□ -0.21
MFSD4A-208	ENST00000539267		H3BMM0	161 aa		13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	NCR2	O95944	276 aa		13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	PPBP	P02775	128 aa		13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	RNASE3	P12724	160 aa	Known RBP	13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	PRSS3P2	Q8NHM4	247 aa		13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	SCRT2	Q9NQ03	307 aa		13.73	□□□□□ -0.21
MFSD4A-208	ENST00000539267	SAP30	O75446	220 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	CD7	P09564	240 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	KRTDAP	P60985	99 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	TDRG1	Q3Y452	100 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	SPRY2	O43597	315 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	PMCHL1	Q16048	86 aa		13.72	□□□□□ -0.21
MFSD4A-208	ENST00000539267	IGHV1-24	A0A0C4DH33	117 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	NPY	P01303	97 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	FXYD7	P58549	80 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	FA2H	Q7L5A8	372 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	TMEM158	Q8WZ71	300 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	AP5S1	Q9NUS5	200 aa		13.71	□□□□□ -0.21
MFSD4A-208	ENST00000539267	LOC389332	A0A1B0GUA5	103 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267		A8MTW9	85 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	PF4	P02776	101 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	ZNF747	Q9BV97	191 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	IFI27	P40305	119 aa	Predicted RBP	13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	LINC00482	Q8N8I6	264 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	SPATA3	Q8NHX4	192 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	LAMTOR2	Q9Y2Q5	125 aa		13.7	□□□□□ -0.22
MFSD4A-208	ENST00000539267	SORL1	Q92673	2214 aa		13.69	□□□□□ -0.22
MFSD4A-208	ENST00000539267	IGHV1OR15-1	A0A075B7D0	117 aa		13.69	□□□□□ -0.22
MFSD4A-208	ENST00000539267	ODF3L2	Q3SX64	289 aa		13.69	□□□□□ -0.22
MFSD4A-208	ENST00000539267	AGRN	O00468	2067 aa		13.69	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1B	A6NDE4	496 aa	Known RBP	13.68	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1E	A6NEQ0	496 aa	Known RBP	13.68	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1D	P0C7P1	496 aa	Known RBP	13.68	□□□□□ -0.22
MFSD4A-208	ENST00000539267	C2orf88	Q9BSF0	95 aa		13.68	□□□□□ -0.22
MFSD4A-208	ENST00000539267	GAS8-AS1	O95177	125 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	C3orf79	P0CE67	100 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	C12orf54	Q6X4T0	127 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267		Q8N1Y9	231 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	C3orf56	Q8N813	242 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	CRX	O43186	299 aa	Predicted RBP	13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	AP1S3	Q96PC3	154 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	MAP1LC3A	Q9H492	121 aa		13.67	□□□□□ -0.22
MFSD4A-208	ENST00000539267	TRAV26-2	A0A0B4J265	109 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	IGHV3-16	A0A0C4DH30	117 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	OR11H12	B2RN74	326 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	NXPH4	O95158	308 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	TNFRSF6B	O95407	300 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	DPH3P1	Q9H4G8	78 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	COL6A5	A8TX70	2615 aa		13.66	□□□□□ -0.22
MFSD4A-208	ENST00000539267	LEPROTL1	O95214	131 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	GATA1	P15976	413 aa	Predicted RBP	13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	C14orf178	Q8N769	122 aa	Predicted RBP	13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	IGLV1-51	P01701	117 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1A1	P0DJD3	496 aa	Known RBP	13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1C	P0DJD4	496 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	RBMY1F	Q15415	496 aa	Known RBP	13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	STH	Q8IWL8	128 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	OR2K2	Q8NGT1	345 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	MDFIC	Q9P1T7	246 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	STAB1	Q9NY15	2570 aa		13.65	□□□□□ -0.22
MFSD4A-208	ENST00000539267	VWF	P04275	2813 aa		13.64	□□□□□ -0.23
MFSD4A-208	ENST00000539267	MRAP2	Q96G30	205 aa		13.64	□□□□□ -0.23
MFSD4A-208	ENST00000539267	C9orf85	Q96MD7	179 aa		13.64	□□□□□ -0.23
MFSD4A-208	ENST00000539267	NDUFAF3	Q9BU61	184 aa		13.64	□□□□□ -0.23
MFSD4A-208	ENST00000539267	TRGV11	A0A075B6L2	103 aa		13.63	□□□□□ -0.23
MFSD4A-208	ENST00000539267	CBY3	A6NI87	242 aa		13.63	□□□□□ -0.23
MFSD4A-208	ENST00000539267	BTF3	P20290	206 aa	Known RBP	13.63	□□□□□ -0.23
MFSD4A-208	ENST00000539267	TRRAP	Q9Y4A5	3859 aa		13.63	□□□□□ -0.23
MFSD4A-208	ENST00000539267	CLUHP3	Q96NS8	147 aa		13.63	□□□□□ -0.23
MFSD4A-208	ENST00000539267	MGP	P08493	103 aa		13.62	□□□□□ -0.23
MFSD4A-208	ENST00000539267	HTN1	P15515	57 aa		13.62	□□□□□ -0.23
MFSD4A-208	ENST00000539267	SHISA2	Q6UWI4	295 aa		13.62	□□□□□ -0.23
MFSD4A-208	ENST00000539267		Q8N976	141 aa		13.62	□□□□□ -0.23
MFSD4A-208	ENST00000539267	NXT2	Q9NPJ8	142 aa	Known RBP	13.62	□□□□□ -0.23
MFSD4A-208	ENST00000539267	SMIM17	P0DL12	118 aa		13.61	□□□□□ -0.23
MFSD4A-208	ENST00000539267	CMC4	P56277	68 aa	Predicted RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms