RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IGHV3-30P01768 117 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 IGHV3-33P01772 117 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 IGHV3-30-5P0DP03 117 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
VAMP1-206ENST00000538970 RNASE3P12724 160 aaKnown RBP8.35□□□□□ -1.07
VAMP1-206ENST00000538970 ATP6V0CP27449 155 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 FLI1Q01543 452 aaPredicted RBP8.35□□□□□ -1.07
VAMP1-206ENST00000538970 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 CYB561D1Q8N8Q1 229 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
VAMP1-206ENST00000538970 LAGE3Q14657 143 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 ATP6V0E2Q8NHE4 81 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 AQP10Q96PS8 301 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 GTSF1LQ9H1H1 148 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 TMEM167BQ9NRX6 74 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 EPDR1Q9UM22 224 aa8.34□□□□□ -1.07
VAMP1-206ENST00000538970 CXorf1O96002 111 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 MBP02144 154 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 LINC00694P0DN24 101 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 SUMO1P63165 101 aaKnown RBP8.33□□□□□ -1.08
VAMP1-206ENST00000538970 SERF2P84101 59 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 SH3BGRL3Q9H299 93 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 PARLQ9H300 379 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 DNAH8Q96JB1 4490 aa8.33□□□□□ -1.08
VAMP1-206ENST00000538970 IGKV3D-20A0A0C4DH25 116 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 FAM229AH3BQW9 127 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 SAPCD1Q5SSQ6 148 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 ZFP2Q6ZN57 461 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 Q6ZSN1 163 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 Q8N3U1 123 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 ACTR3CQ9C0K3 210 aaPredicted RBP8.32□□□□□ -1.08
VAMP1-206ENST00000538970 TNFSF18Q9UNG2 199 aa8.32□□□□□ -1.08
VAMP1-206ENST00000538970 A0A1W2PRE2 83 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 A8MWV9 139 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 WFDC2Q14508 124 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 PIK3CD-AS1Q5SR53 167 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 FAM30AQ9NZY2 134 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
VAMP1-206ENST00000538970 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 J3QL48 77 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
VAMP1-206ENST00000538970 ASIPP42127 132 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 GAGE1Q13065 139 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 GAGE4Q13068 117 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 GAGE5Q13069 117 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 UFSP1Q6NVU6 142 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 Q86TA4 180 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
VAMP1-206ENST00000538970 TRAV34A0A0B4J273 112 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 C1QBP02746 253 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 ZNF726P1Q15940 193 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 LGALSLQ3ZCW2 172 aaPredicted RBP8.29□□□□□ -1.08
VAMP1-206ENST00000538970 Q5BKY6 102 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 RPL7L1Q6DKI1 246 aaKnown RBP8.29□□□□□ -1.08
VAMP1-206ENST00000538970 MED28Q9H204 178 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 IL36BQ9NZH7 164 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 Q9UF83 564 aa8.29□□□□□ -1.08
VAMP1-206ENST00000538970 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 FABP5P3A8MUU1 101 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 PEX7O00628 323 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 PTTG1O95997 202 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 Q6ZSA8 131 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 DAZ4Q86SG3 579 aaKnown RBP8.28□□□□□ -1.08
VAMP1-206ENST00000538970 C14orf178Q8N769 122 aaPredicted RBP8.28□□□□□ -1.08
VAMP1-206ENST00000538970 OR2T35Q8NGX2 323 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 SAMD10Q9BYL1 202 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 JPT2Q9H910 190 aa8.28□□□□□ -1.08
VAMP1-206ENST00000538970 DAZ3Q9NR90 486 aaKnown RBP8.28□□□□□ -1.08
VAMP1-206ENST00000538970 CTXND1A0A1B0GTU2 59 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 B4DEV8 164 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 H3BVH4 76 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 IFNA7P01567 189 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 GIPP09681 153 aaPredicted RBP8.27□□□□□ -1.09
VAMP1-206ENST00000538970 UBE2G2P60604 165 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 DNLZQ5SXM8 178 aa8.27□□□□□ -1.09
VAMP1-206ENST00000538970 A0A087WWC5 75 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 BORCS7-ASMTA0A0B4J1R7 106 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 FAM74A7A6NL05 159 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 KRBOX1C9JBD0 128 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 RHODO00212 210 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 LECT2O14960 151 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 CRIP1P50238 77 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 FGF8P55075 233 aaPredicted RBP8.26□□□□□ -1.09
VAMP1-206ENST00000538970 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 INO80EQ8NBZ0 244 aaPredicted RBP8.26□□□□□ -1.09
VAMP1-206ENST00000538970 HIST1H2BAQ96A08 127 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
VAMP1-206ENST00000538970 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.25□□□□□ -1.09
VAMP1-206ENST00000538970 M0R036 132 aa8.25□□□□□ -1.09
VAMP1-206ENST00000538970 ARMS2P0C7Q2 107 aa8.25□□□□□ -1.09
VAMP1-206ENST00000538970 COX8CQ7Z4L0 72 aa8.25□□□□□ -1.09
VAMP1-206ENST00000538970 OR11H4Q8NGC9 324 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms