RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, humanhuman

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-205ENST00000538828 RS1O15537 224 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 IGHV3-53P01767 116 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 CXCL1P09341 107 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 GATA1P15976 413 aaPredicted RBP8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 AKR1C3P42330 323 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 ZFP2Q6ZN57 461 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 PCNPQ8WW12 178 aaKnown RBP8.48□□□□□ -1.05
CLTCL1-205ENST00000538828 A8MWV9 139 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 K7EQD1 137 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 ASIPP42127 132 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 CRIP1P50238 77 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 CFAP126Q5VTH2 177 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 C11orf52Q96A22 123 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 ZC2HC1AQ96GY0 325 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
CLTCL1-205ENST00000538828 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.05
CLTCL1-205ENST00000538828 KRBOX1C9JBD0 128 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 SIVA1O15304 175 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 MGST1P10620 155 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 GYPEP15421 78 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 SRIP30626 198 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 TAGLN2P37802 199 aaKnown RBP8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 RHOHQ15669 191 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 ZNF506Q5JVG8 444 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 AKAP14Q86UN6 197 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
CLTCL1-205ENST00000538828 DNAH17Q9UFH2 4485 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 PGPEP1LA6NFU8 196 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 B4DEV8 164 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 SH2D1AO60880 128 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 SCRT2Q9NQ03 307 aa8.45□□□□□ -1.06
CLTCL1-205ENST00000538828 RHODO00212 210 aa8.44□□□□□ -1.06
CLTCL1-205ENST00000538828 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
CLTCL1-205ENST00000538828 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 SCO2A0A1W2PP80 73 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 PDE6DO43924 150 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 NXPH4O95158 308 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 BAGE2Q86Y30 109 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 PARLQ9H300 379 aa8.43□□□□□ -1.06
CLTCL1-205ENST00000538828 IFNA1P01562 189 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 ARMS2P0C7Q2 107 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 DNAH10OSP0CZ25 163 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 UFSP1Q6NVU6 142 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 GNG13Q9P2W3 67 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 DNAH2Q9P225 4427 aa8.42□□□□□ -1.06
CLTCL1-205ENST00000538828 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 CCL20P78556 96 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 MEF2BQ02080 365 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 ZFP82Q8N141 532 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 C10orf126Q8N4M7 172 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 PHLDA3Q9Y5J5 127 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 LY96Q9Y6Y9 160 aa8.41□□□□□ -1.06
CLTCL1-205ENST00000538828 A0A1B0GV50 99 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 H3BVH4 76 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 NDUFS6O75380 124 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 OR5AL1P0C617 328 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 RPL35P42766 123 aaKnown RBP8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 SFRP2Q96HF1 295 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 BIN3Q9NQY0 253 aa8.4□□□□□ -1.06
CLTCL1-205ENST00000538828 M0R036 132 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 SNAI2O43623 268 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 LINC00694P0DN24 101 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 BCL2P10415 239 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 EVI2AP22794 236 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 BLOC1S1P78537 153 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 LYPD6BQ8NI32 183 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 GTSF1LQ9H1H1 148 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 VAX2Q9UIW0 290 aa8.39□□□□□ -1.07
CLTCL1-205ENST00000538828 TRBV10-1A0A0K0K1A3 114 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 TNP2Q05952 138 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 LELP1Q5T871 98 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 NHLRC2Q8NBF2 726 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 ATP6V0E2Q8NHE4 81 aa8.38□□□□□ -1.07
CLTCL1-205ENST00000538828 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 A0A087WWC5 75 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 TRAV8-6A0A0B4J262 113 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 IGHV3-38A0A0C4DH36 116 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 LOC100131303A0A0U1RQF7 123 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 GRIFINA4D1Z8 144 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 CRYGDP07320 174 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 LINC00315P59091 139 aa8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
CLTCL1-205ENST00000538828 C19orf71A6NCJ1 209 aa8.36□□□□□ -1.07
CLTCL1-205ENST00000538828 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms