RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 EPM2AB3EWF7 344 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 GGTLC3B5MD39 225 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 CRYGDP07320 174 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 NKX2-5P52952 324 aaPredicted RBP5.85□□□□□ -1.47
DDB1-212ENST00000538470 EIF5AP63241 154 aaKnown RBP5.85□□□□□ -1.47
DDB1-212ENST00000538470 RHOHQ15669 191 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 NHLRC2Q8NBF2 726 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 TVP23CQ96ET8 276 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 TMEM167BQ9NRX6 74 aa5.85□□□□□ -1.47
DDB1-212ENST00000538470 IGHV3-38A0A0C4DH36 116 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 TRBV6-4A0A1B0GX49 114 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 GNRH2O43555 120 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 TCRAP04437 139 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 PFN1P07737 140 aaKnown RBP5.84□□□□□ -1.47
DDB1-212ENST00000538470 SEC11BP0C7V7 166 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 C9orf62Q8N4C0 152 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 TMEM75Q8N9X5 138 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 STOML3Q8TAV4 291 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 SUN5Q8TC36 379 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
DDB1-212ENST00000538470 PTH2Q96A98 100 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 PRADC1Q9BSG0 188 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
DDB1-212ENST00000538470 TRAV8-6A0A0B4J262 113 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 UMAD1C9J7I0 102 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 RS1O15537 224 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 PSCAO43653 123 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 IFNA7P01567 189 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 MGST1P10620 155 aaKnown RBP5.83□□□□□ -1.48
DDB1-212ENST00000538470 SUMO1P63165 101 aaKnown RBP5.83□□□□□ -1.48
DDB1-212ENST00000538470 LAGE3Q14657 143 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 ZNF876PQ49A33 203 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 SMUG1Q53HV7 270 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 CYB561D1Q8N8Q1 229 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 SFT2D1Q8WV19 159 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 FRZBQ92765 325 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 SGK494Q96LW2 274 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 C9orf85Q96MD7 179 aa5.83□□□□□ -1.48
DDB1-212ENST00000538470 LOC100131303A0A0U1RQF7 123 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 FAM74A7A6NL05 159 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 IBA57-AS1B1ANH7 110 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 GCGP01275 180 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 GCSHP23434 173 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 XGP55808 180 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 KRTAP10-1P60331 282 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 FLI1Q01543 452 aaPredicted RBP5.82□□□□□ -1.48
DDB1-212ENST00000538470 PIK3CD-AS1Q5SR53 167 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 LELP1Q5T871 98 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 CFAP126Q5VTH2 177 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 CST9LP1Q5W188 147 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 EIF5AL1Q6IS14 154 aaKnown RBP5.82□□□□□ -1.48
DDB1-212ENST00000538470 SLC51BQ86UW2 128 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 SLC25A29Q8N8R3 303 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 PSG8Q9UQ74 426 aa5.82□□□□□ -1.48
DDB1-212ENST00000538470 A0A1W2PRE2 83 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 IGLV2-11P01706 119 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 H2AFB1P0C5Y9 115 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 ZNF80P51504 273 aaPredicted RBP5.81□□□□□ -1.48
DDB1-212ENST00000538470 OR10J3Q5JRS4 329 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 ZNF506Q5JVG8 444 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 SAPCD1Q5SSQ6 148 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 Q5VSD8 79 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 DPPA3Q6W0C5 159 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 TMEM70Q9BUB7 260 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 C11orf21Q9P2W6 132 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 EPDR1Q9UM22 224 aa5.81□□□□□ -1.48
DDB1-212ENST00000538470 DNAH8Q96JB1 4490 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 VPS13BQ7Z7G8 4022 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 IGLV5-52A0A0A0MRZ9 124 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 TRAV34A0A0B4J273 112 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 LRCOL1A6NCL2 159 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 A8MWV9 139 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 PEX7O00628 323 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 PAGE4O60829 102 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
DDB1-212ENST00000538470 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.48
DDB1-212ENST00000538470 ZFP2Q6ZN57 461 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 PRNTQ86SH4 94 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 Q8N814 137 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 ATP6V0E2Q8NHE4 81 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 LINC00479Q96M42 142 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 GTSF1LQ9H1H1 148 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 GNG13Q9P2W3 67 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 HERC1Q15751 4861 aa5.8□□□□□ -1.48
DDB1-212ENST00000538470 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 INAFM2P0DMQ5 153 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 LINC00694P0DN24 101 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 S100A4P26447 101 aaKnown RBP5.79□□□□□ -1.48
DDB1-212ENST00000538470 SULT1A2P50226 295 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 RAB5CP51148 216 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 ALKAL2Q6UX46 152 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 Q86TA4 180 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 NKX6-2Q9C056 277 aaPredicted RBP5.79□□□□□ -1.48
DDB1-212ENST00000538470 PARLQ9H300 379 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 IL36BQ9NZH7 164 aa5.79□□□□□ -1.48
DDB1-212ENST00000538470 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
DDB1-212ENST00000538470 A0A087WWC5 75 aa5.78□□□□□ -1.48
DDB1-212ENST00000538470 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms