RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 SMIM2Q9BVW6 85 aa8.52□□□□□ -1.04
SLC28A1-204ENST00000538177 SMIM17P0DL12 118 aa8.52□□□□□ -1.05
SLC28A1-204ENST00000538177 AP1S3Q96PC3 154 aa8.52□□□□□ -1.05
SLC28A1-204ENST00000538177 TMEM208Q9BTX3 173 aa8.52□□□□□ -1.05
SLC28A1-204ENST00000538177 DKK2Q9UBU2 259 aa8.52□□□□□ -1.05
SLC28A1-204ENST00000538177 ATP5LO75964 103 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 ODF1Q14990 250 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 ADAMTSL5Q6ZMM2 481 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 TMEM86BQ8N661 226 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 DUX5Q96PT3 197 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 ZMAT4Q9H898 229 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 MXRA5Q9NR99 2828 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 TRAV12-3A0A0B4J271 114 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 FGF6P10767 208 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 G0S2P27469 103 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 SUMO2P61956 95 aaKnown RBP8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 GAGE1Q13065 139 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 WFDC12Q8WWY7 111 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 KIF25-AS1Q9Y6Z4 181 aa8.51□□□□□ -1.05
SLC28A1-204ENST00000538177 MUC4Q99102 2169 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 TEX15Q9BXT5 2789 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 DLEU1O43261 78 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 DUSP14O95147 198 aaKnown RBP8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 LINC00315P59091 139 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 MPV17L2Q567V2 206 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 C18orf65Q6ZTR6 163 aa8.5□□□□□ -1.05
SLC28A1-204ENST00000538177 K7EMI3 77 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 NUDT3O95989 172 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 PPP1R17O96001 155 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 PRSS1P07477 247 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 CD7P09564 240 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 C12orf54Q6X4T0 127 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 FOXI2Q6ZQN5 318 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 TEX29Q8N6K0 151 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 CDKN1BP46527 198 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 SLURP1P55000 103 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 RPL39LQ96EH5 51 aaKnown RBP8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 APCP25054 2843 aa8.49□□□□□ -1.05
SLC28A1-204ENST00000538177 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 LINC01619G3V211 115 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 MGPP08493 103 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 ORMDL2Q53FV1 153 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 C9orf85Q96MD7 179 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 FOXC2Q99958 501 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 IGKV3-20P01619 116 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 DEFB136Q30KP8 78 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 AMTNQ6UX39 209 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 HHLA3Q9XRX5 114 aa8.48□□□□□ -1.05
SLC28A1-204ENST00000538177 SORL1Q92673 2214 aa8.47□□□□□ -1.05
SLC28A1-204ENST00000538177 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
SLC28A1-204ENST00000538177 TRAV2A0A0B4J234 112 aa8.47□□□□□ -1.05
SLC28A1-204ENST00000538177 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
SLC28A1-204ENST00000538177 ORAOV1Q8WV07 137 aa8.47□□□□□ -1.05
SLC28A1-204ENST00000538177 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 IGKCP01834 107 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 OR11H1Q8NG94 326 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 TOMM6Q96B49 74 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 AGRNO00468 2067 aa8.46□□□□□ -1.05
SLC28A1-204ENST00000538177 A8MTW9 85 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 SIVA1O15304 175 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 DPM2O94777 84 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 OR9G4Q8NGQ1 327 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 JPT2Q9H910 190 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 PEMTQ9UBM1 199 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 COX11Q9Y6N1 276 aa8.46□□□□□ -1.06
SLC28A1-204ENST00000538177 TLN2Q9Y4G6 2542 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 A0A087WX48 190 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 Q6ZSV7 163 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 Q8N1Y9 231 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 MDFICQ9P1T7 246 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 TRAV12-1A0A0B4J245 112 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
SLC28A1-204ENST00000538177 ITPR3Q14573 2671 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 NPSP0C0P6 89 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 POLR2KP53803 58 aaKnown RBP8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 HIST2H2BCQ6DN03 193 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 SUMO4Q6EEV6 95 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 PCP2Q8IVA1 136 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 SYT8Q8NBV8 401 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 DLX4Q92988 240 aaPredicted RBP8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 MRPL35Q9NZE8 188 aaKnown RBP8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 DNAJC9-AS1A6NH13 148 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 KNCNA6PVL3 124 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 HLA-DRB4P13762 266 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 NMUP48645 174 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 DEFB131AP59861 70 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 TMEM97Q5BJF2 176 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 Q6ZVH6 145 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 HLA-DRB4X5D2U9 266 aa8.44□□□□□ -1.06
SLC28A1-204ENST00000538177 A0A087WWL8 130 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms