RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 C9orf85Q96MD7 179 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 AP1S3Q96PC3 154 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 MUC4Q99102 2169 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 ZNF688P0C7X2 276 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 GAGE1Q13065 139 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 BATFQ16520 125 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 AMTNQ6UX39 209 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 C2orf91Q6ZV80 131 aa6.93□□□□□ -1.3
UBE3B-207ENST00000537063 RPL32P62910 135 aaKnown RBP6.92□□□□□ -1.3
UBE3B-207ENST00000537063 WFDC3Q8IUB2 231 aa6.92□□□□□ -1.3
UBE3B-207ENST00000537063 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
UBE3B-207ENST00000537063 C18orf65Q6ZTR6 163 aa6.92□□□□□ -1.3
UBE3B-207ENST00000537063 DLEU1O43261 78 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 DUSP14O95147 198 aaKnown RBP6.91□□□□□ -1.3
UBE3B-207ENST00000537063 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
UBE3B-207ENST00000537063 FAM159AQ6UWV7 190 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 IGHV3-16A0A0C4DH30 117 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 LINC01619G3V211 115 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 ATP5LO75964 103 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 SMIM17P0DL12 118 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 HINT1P49773 126 aaPredicted RBP6.91□□□□□ -1.3
UBE3B-207ENST00000537063 C14orf178Q8N769 122 aaPredicted RBP6.91□□□□□ -1.3
UBE3B-207ENST00000537063 DKK2Q9UBU2 259 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 NAV2Q8IVL1 2488 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 TENM4Q6N022 2769 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 SPRY2O43597 315 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 PPP1R17O96001 155 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 BOD1L2Q8IYS8 172 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 WFDC11Q8NEX6 87 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 TMEM208Q9BTX3 173 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 NBPF19A0A087WUL8 3843 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 TEX15Q9BXT5 2789 aa6.91□□□□□ -1.3
UBE3B-207ENST00000537063 TRAV12-3A0A0B4J271 114 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 TFPI2P48307 235 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 SLURP1P55000 103 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 EPG5Q9HCE0 2579 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 CDKN1BP46527 198 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 KRTAP1-1Q07627 177 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
UBE3B-207ENST00000537063 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
UBE3B-207ENST00000537063 ABCA12Q86UK0 2595 aa6.9□□□□□ -1.31
UBE3B-207ENST00000537063 ORMDL2Q53FV1 153 aa6.9□□□□□ -1.31
UBE3B-207ENST00000537063 TOMM6Q96B49 74 aa6.9□□□□□ -1.31
UBE3B-207ENST00000537063 KMT2BQ9UMN6 2715 aaPredicted RBP6.9□□□□□ -1.31
UBE3B-207ENST00000537063 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
UBE3B-207ENST00000537063 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 DUX5Q96PT3 197 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 HLA-DRB4P13762 266 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 DEFB136Q30KP8 78 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 Q6ZSV7 163 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 HLA-DRB4X5D2U9 266 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 ITPR3Q14573 2671 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 DNAJC9-AS1A6NH13 148 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 SIVA1O15304 175 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 CD7P09564 240 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 C12orf54Q6X4T0 127 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 PEMTQ9UBM1 199 aa6.89□□□□□ -1.31
UBE3B-207ENST00000537063 PDZD2O15018 2839 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 IGHV1OR15-1A0A075B7D0 117 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 PLA2G2AP14555 144 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 ORAOV1Q8WV07 137 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 OR11H1Q8NG94 326 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 A0A087WX48 190 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 TRBV6-5A0A0K0K1A5 114 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 IGKCP01834 107 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 MGPP08493 103 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 Q8N1Y9 231 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 FOXC2Q99958 501 aa6.88□□□□□ -1.31
UBE3B-207ENST00000537063 DPM2O94777 84 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 NUDT3O95989 172 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 POLR2KP53803 58 aaKnown RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 FHL3Q13643 280 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 SPINK13Q1W4C9 94 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 SUMO4Q6EEV6 95 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 ZNF256Q9Y2P7 627 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 COX11Q9Y6N1 276 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 ANK3Q12955 4377 aaKnown RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1A1P0DJD3 496 aaKnown RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1CP0DJD4 496 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 G0S2P27469 103 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1FQ15415 496 aaKnown RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 MDFICQ9P1T7 246 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 PRSS1P07477 247 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
UBE3B-207ENST00000537063 JPT2Q9H910 190 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 ESM1Q9NQ30 184 aa6.87□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1BA6NDE4 496 aaKnown RBP6.86□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1EA6NEQ0 496 aaKnown RBP6.86□□□□□ -1.31
UBE3B-207ENST00000537063 RBMY1DP0C7P1 496 aaKnown RBP6.86□□□□□ -1.31
UBE3B-207ENST00000537063 TMEM61Q8N0U2 210 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms