RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 HLA-DRB4P13762 266 aa16.83■□□□□ 0.28
HMGA2-206ENST00000536545 SPINK13Q1W4C9 94 aa16.83■□□□□ 0.28
HMGA2-206ENST00000536545 JMJD8Q96S16 334 aa16.83■□□□□ 0.28
HMGA2-206ENST00000536545 HLA-DRB4X5D2U9 266 aa16.83■□□□□ 0.28
HMGA2-206ENST00000536545 TRAV12-2A0A075B6T6 113 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 KNCNA6PVL3 124 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 M0R381 172 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 SPRY2O43597 315 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 DDTP30046 118 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 CD300EQ496F6 205 aaPredicted RBP16.82■□□□□ 0.28
HMGA2-206ENST00000536545 AGRNO00468 2067 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 TNFRSF6BO95407 300 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 MAP1LC3AQ9H492 121 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 MAP6D1Q9H9H5 199 aa16.82■□□□□ 0.28
HMGA2-206ENST00000536545 A0A096LNJ9 63 aa16.81■□□□□ 0.28
HMGA2-206ENST00000536545 GATA1P15976 413 aaPredicted RBP16.81■□□□□ 0.28
HMGA2-206ENST00000536545 PROK1P58294 105 aa16.81■□□□□ 0.28
HMGA2-206ENST00000536545 SPATA12Q7Z6I5 190 aa16.81■□□□□ 0.28
HMGA2-206ENST00000536545 SPAG8Q99932 426 aaPredicted RBP16.81■□□□□ 0.28
HMGA2-206ENST00000536545 TMEM70Q9BUB7 260 aa16.81■□□□□ 0.28
HMGA2-206ENST00000536545 VAMP8Q9BV40 100 aa16.81■□□□□ 0.28
HMGA2-206ENST00000536545 LINC01546A6NGU7 62 aa16.8■□□□□ 0.28
HMGA2-206ENST00000536545 CRXO43186 299 aaPredicted RBP16.8■□□□□ 0.28
HMGA2-206ENST00000536545 SETD2Q9BYW2 2564 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-206ENST00000536545 TRAV25A0A0B4J276 109 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 H3BMM0 161 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 NRACQ8N912 160 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 HSPB8Q9UJY1 196 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 SORL1Q92673 2214 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 OR4C46A6NHA9 309 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 OR2K2Q8NGT1 345 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 MRAP2Q96G30 205 aa16.79■□□□□ 0.28
HMGA2-206ENST00000536545 ZNF256Q9Y2P7 627 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-206ENST00000536545 TRAV26-2A0A0B4J265 109 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 RBMY1BA6NDE4 496 aaKnown RBP16.78■□□□□ 0.28
HMGA2-206ENST00000536545 RBMY1EA6NEQ0 496 aaKnown RBP16.78■□□□□ 0.28
HMGA2-206ENST00000536545 ADARB2-AS1A8MUL3 147 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 SYS1-DBNDD2H3BUS1 97 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 CD7P09564 240 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 RBMY1DP0C7P1 496 aaKnown RBP16.78■□□□□ 0.28
HMGA2-206ENST00000536545 C20orf144Q9BQM9 153 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 DPH3P1Q9H4G8 78 aa16.78■□□□□ 0.28
HMGA2-206ENST00000536545 IGHV3-16A0A0C4DH30 117 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 ZNF124Q15973 351 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 DEFB125Q8N687 156 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 C9orf85Q96MD7 179 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 AP1S3Q96PC3 154 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 PAM16Q9Y3D7 125 aa16.77■□□□□ 0.28
HMGA2-206ENST00000536545 IGHV1OR15-1A0A075B7D0 117 aa16.77■□□□□ 0.27
HMGA2-206ENST00000536545 NXT2Q9NPJ8 142 aaKnown RBP16.77■□□□□ 0.27
HMGA2-206ENST00000536545 MUC4Q99102 2169 aa16.75■□□□□ 0.27
HMGA2-206ENST00000536545 IGLV2-18A0A075B6J9 118 aa16.75■□□□□ 0.27
HMGA2-206ENST00000536545 PRSS47A8MTI9 375 aa16.75■□□□□ 0.27
HMGA2-206ENST00000536545 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
HMGA2-206ENST00000536545 SETXQ7Z333 2677 aaKnown RBP16.75■□□□□ 0.27
HMGA2-206ENST00000536545 NSD1Q96L73 2696 aaPredicted RBP16.75■□□□□ 0.27
HMGA2-206ENST00000536545 INAFM1C9JVW0 142 aa16.74■□□□□ 0.27
HMGA2-206ENST00000536545 RBMY1A1P0DJD3 496 aaKnown RBP16.74■□□□□ 0.27
HMGA2-206ENST00000536545 RBMY1CP0DJD4 496 aa16.74■□□□□ 0.27
HMGA2-206ENST00000536545 RBMY1FQ15415 496 aaKnown RBP16.74■□□□□ 0.27
HMGA2-206ENST00000536545 Q8N1Y9 231 aa16.74■□□□□ 0.27
HMGA2-206ENST00000536545 C14orf178Q8N769 122 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-206ENST00000536545 MAP1LC3CQ9BXW4 147 aa16.74■□□□□ 0.27
HMGA2-206ENST00000536545 HBDP02042 147 aa16.74■□□□□ 0.27
HMGA2-206ENST00000536545 FXYD7P58549 80 aa16.73■□□□□ 0.27
HMGA2-206ENST00000536545 ODF3L2Q3SX64 289 aa16.73■□□□□ 0.27
HMGA2-206ENST00000536545 POM121L12Q8N7R1 296 aa16.73■□□□□ 0.27
HMGA2-206ENST00000536545 Q8N8P6 123 aa16.73■□□□□ 0.27
HMGA2-206ENST00000536545 PET117Q6UWS5 81 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 ATOH7Q8N100 152 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 NDUFAF3Q9BU61 184 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 MDFICQ9P1T7 246 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 KIF25-AS1Q9Y6Z4 181 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 DEFA6Q01524 100 aa16.72■□□□□ 0.27
HMGA2-206ENST00000536545 C20orf202A1L168 122 aa16.71■□□□□ 0.27
HMGA2-206ENST00000536545 SPATA45Q537H7 98 aa16.71■□□□□ 0.27
HMGA2-206ENST00000536545 WNK1Q9H4A3 2382 aa16.7■□□□□ 0.26
HMGA2-206ENST00000536545 LINC00315P59091 139 aa16.7■□□□□ 0.26
HMGA2-206ENST00000536545 RASL10AQ92737 203 aa16.7■□□□□ 0.26
HMGA2-206ENST00000536545 C14orf144Q96I85 54 aa16.7■□□□□ 0.26
HMGA2-206ENST00000536545 TRGV11A0A075B6L2 103 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 MGPP08493 103 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 KRTAP10-3P60369 221 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 CLUHP3Q96NS8 147 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 FOSL1P15407 271 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 NSUN5P1Q3KNT7 163 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 LINC01545Q5VT33 79 aa16.69■□□□□ 0.26
HMGA2-206ENST00000536545 TRAV9-2A0A087WT02 112 aa16.68■□□□□ 0.26
HMGA2-206ENST00000536545 HIVEP1P15822 2718 aa16.67■□□□□ 0.26
HMGA2-206ENST00000536545 MAJINQ3KP22 176 aa16.67■□□□□ 0.26
HMGA2-206ENST00000536545 SMIM2Q9BVW6 85 aa16.67■□□□□ 0.26
HMGA2-206ENST00000536545 JPT2Q9H910 190 aa16.67■□□□□ 0.26
HMGA2-206ENST00000536545 FCER1GP30273 86 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 NDUFA11Q86Y39 141 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 SYT8Q8NBV8 401 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 SAP30O75446 220 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 CTAG1AP78358 180 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 RPL39LQ96EH5 51 aaKnown RBP16.66■□□□□ 0.26
HMGA2-206ENST00000536545 C20orf78Q9BR46 151 aa16.66■□□□□ 0.26
HMGA2-206ENST00000536545 MIEN1Q9BRT3 115 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms