RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, human

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAAF1-206	ENST00000535936	IGHV3-16	A0A0C4DH30	117 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	IGHV3-30	P01768	117 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	IGHV3-33	P01772	117 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	IGHV3-30-3	P0DP02	117 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	IGHV3-30-5	P0DP03	117 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	S100A4	P26447	101 aa	Known RBP	6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	FGF8	P55075	233 aa	Predicted RBP	6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	IL15RA	Q13261	267 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	ZNF876P	Q49A33	203 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	GOLT1A	Q6ZVE7	132 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	RBM38	Q9H0Z9	239 aa	Known RBP	6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	GTSF1L	Q9H1H1	148 aa		6.13	□□□□□ -1.43
PAAF1-206	ENST00000535936	GNRH2	O43555	120 aa		6.12	□□□□□ -1.43
PAAF1-206	ENST00000535936	TYMS	P04818	313 aa		6.12	□□□□□ -1.43
PAAF1-206	ENST00000535936	ELOB	Q15370	118 aa		6.12	□□□□□ -1.43
PAAF1-206	ENST00000535936	LRCOL1	A6NCL2	159 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936		A8MWV9	139 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	RS1	O15537	224 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	SMUG1	Q53HV7	270 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	SAPCD1	Q5SSQ6	148 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	SERTAD4-AS1	Q5TG53	156 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	LINC00299	Q6ZSB3	139 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	SLC25A29	Q8N8R3	303 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	OR10G9	Q8NGN4	311 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	PTH2	Q96A98	100 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	OR5AC2	Q9NZP5	309 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	HSPB11	Q9Y547	144 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	DMBT1	Q9UGM3	2413 aa	Predicted RBP	6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	DNAH5	Q8TE73	4624 aa		6.11	□□□□□ -1.43
PAAF1-206	ENST00000535936	TRAV8-1	A0A0A6YYK1	113 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	LOC100131303	A0A0U1RQF7	123 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936		F6UZH7	168 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	SSNA1	O43805	119 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	MB	P02144	154 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	RPL12	P30050	165 aa	Known RBP	6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	C14orf177	Q52M58	125 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936		Q6ZQT7	251 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936		Q8N976	141 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	C5orf17	Q8NAS9	161 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	PPP1R1C	Q8WVI7	109 aa		6.1	□□□□□ -1.43
PAAF1-206	ENST00000535936	RBFOX3	A6NFN3	312 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	RHOD	O00212	210 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	SIX6	O95475	246 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	GCG	P01275	180 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	CDC34	P49427	236 aa	Predicted RBP	6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	LGALSL	Q3ZCW2	172 aa	Predicted RBP	6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	PIK3CD-AS1	Q5SR53	167 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	CFAP126	Q5VTH2	177 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	ZFP2	Q6ZN57	461 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	OR10G7	Q8NGN6	311 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936	TMEM167B	Q9NRX6	74 aa		6.09	□□□□□ -1.43
PAAF1-206	ENST00000535936		A0A087WX48	190 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	IGHV3-73	A0A0B4J1V6	119 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	INMT-MINDY4	F8WBC2	141 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	ASIP	P42127	132 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	DEFA1	P59665	94 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	DEFA3	P59666	94 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	FLI1	Q01543	452 aa	Predicted RBP	6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936		Q0VG73	95 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	CHCHD7	Q9BUK0	85 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	SMIM3	Q9BZL3	60 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	PSG8	Q9UQ74	426 aa		6.08	□□□□□ -1.44
PAAF1-206	ENST00000535936	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	GAGE12J	A6NER3	117 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	MPC2	O95563	127 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	TCRA	P04437	139 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	PKIA	P61925	76 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	HAMP	P81172	84 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	GAGE1	Q13065	139 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	GAGE4	Q13068	117 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	GAGE5	Q13069	117 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	GAGE13	Q4V321	117 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	ZNF506	Q5JVG8	444 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	CYB561D1	Q8N8Q1	229 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	KRTAP4-2	Q9BYR5	136 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	PLA2G2D	Q9UNK4	145 aa		6.07	□□□□□ -1.44
PAAF1-206	ENST00000535936	APOB	P04114	4563 aa	Known RBP	6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	IGKV2D-24	A0A075B6R9	120 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	FABP5P3	A8MUU1	101 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	CXorf1	O96002	111 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	CRP	P02741	224 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	SERF2	P84101	59 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	PRNT	Q86SH4	94 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	TMEM75	Q8N9X5	138 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	SVIP	Q8NHG7	77 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	C9orf85	Q96MD7	179 aa		6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	NKX6-2	Q9C056	277 aa	Predicted RBP	6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	ACTR3C	Q9C0K3	210 aa	Predicted RBP	6.06	□□□□□ -1.44
PAAF1-206	ENST00000535936	PGPEP1L	A6NFU8	196 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936		H0YIZ8	118 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	OXT	P01178	125 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	IFNA7	P01567	189 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	ARL14EPL	P0DKL9	152 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	GNG5	P63218	68 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	RPL36A	P83881	106 aa	Known RBP	6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	OR11H4	Q8NGC9	324 aa		6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	RPL36AL	Q969Q0	106 aa	Known RBP	6.05	□□□□□ -1.44
PAAF1-206	ENST00000535936	SGK494	Q96LW2	274 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms