RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 G3V3Q6 166 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 PFN1P07737 140 aaKnown RBP7.35□□□□□ -1.23
CCDC60-202ENST00000535685 GATA1P15976 413 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-202ENST00000535685 ZNF80P51504 273 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-202ENST00000535685 FLI1Q01543 452 aaPredicted RBP7.35□□□□□ -1.23
CCDC60-202ENST00000535685 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 PIK3CD-AS1Q5SR53 167 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 SAPCD1Q5SSQ6 148 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 OR2T35Q8NGX2 323 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 PCNPQ8WW12 178 aaKnown RBP7.35□□□□□ -1.23
CCDC60-202ENST00000535685 C9orf85Q96MD7 179 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 FAM30AQ9NZY2 134 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 C11orf21Q9P2W6 132 aa7.35□□□□□ -1.23
CCDC60-202ENST00000535685 TRAV9-2A0A087WT02 112 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 FXYD6-FXYD2A0A087WZ82 144 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 RS1O15537 224 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 GCGP01275 180 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 DNAH10OSP0CZ25 163 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 ZNF726P1Q15940 193 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 COX8CQ7Z4L0 72 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 SPATA12Q7Z6I5 190 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 NFE4Q86UQ8 179 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 DNAH5Q8TE73 4624 aa7.34□□□□□ -1.23
CCDC60-202ENST00000535685 TRBV6-4A0A1B0GX49 114 aa7.33□□□□□ -1.24
CCDC60-202ENST00000535685 RGS21Q2M5E4 152 aa7.33□□□□□ -1.24
CCDC60-202ENST00000535685 ZFP69Q49AA0 526 aa7.33□□□□□ -1.24
CCDC60-202ENST00000535685 SGK494Q96LW2 274 aa7.33□□□□□ -1.24
CCDC60-202ENST00000535685 LY96Q9Y6Y9 160 aa7.33□□□□□ -1.24
CCDC60-202ENST00000535685 APOBP04114 4563 aaKnown RBP7.33□□□□□ -1.24
CCDC60-202ENST00000535685 RNASE3P12724 160 aaKnown RBP7.32□□□□□ -1.24
CCDC60-202ENST00000535685 PPT1P50897 306 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 ZNF876PQ49A33 203 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 DNLZQ5SXM8 178 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 CFAP126Q5VTH2 177 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 PRNTQ86SH4 94 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 C10orf126Q8N4M7 172 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 HIST1H2BAQ96A08 127 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 TCEAL7Q9BRU2 100 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 CYTL1Q9NRR1 136 aa7.32□□□□□ -1.24
CCDC60-202ENST00000535685 FAM74A7A6NL05 159 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 FABP5P3A8MUU1 101 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 EVI2AP22794 236 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 FHITP49789 147 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 AKR1C8PQ5T2L2 129 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 DPPA3Q6W0C5 159 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 SLC25A29Q8N8R3 303 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 SYT8Q8NBV8 401 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 ARL2-SNX15V9GYD0 113 aa7.31□□□□□ -1.24
CCDC60-202ENST00000535685 A0A087WWL8 130 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 IGKV3D-20A0A0C4DH25 116 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 TRBV6-1A0A0K0K1D8 114 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 PGPEP1LA6NFU8 196 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 PEX7O00628 323 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 MGST1P10620 155 aaKnown RBP7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ERVFC1-1P60608 527 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ZNF345Q14585 488 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 RHOHQ15669 191 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 LINC01556Q5JQF7 62 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ZNF506Q5JVG8 444 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ZFP2Q6ZN57 461 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 WFDC10BQ8IUB3 73 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 LINC00479Q96M42 142 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 PRADC1Q9BSG0 188 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 MSRB1Q9NZV6 116 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ZFP30Q9Y2G7 519 aa7.3□□□□□ -1.24
CCDC60-202ENST00000535685 ABCA13Q86UQ4 5058 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 TRAV34A0A0B4J273 112 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 LOC100131303A0A0U1RQF7 123 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 A8MWV9 139 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 ARPC5O15511 151 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 IFNA7P01567 189 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 Q86TA4 180 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 KRTAP4-5Q9BYR2 181 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 IL36BQ9NZH7 164 aa7.29□□□□□ -1.24
CCDC60-202ENST00000535685 IGHV3-38A0A0C4DH36 116 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 MAP1LC3B2A6NCE7 125 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 HMSDA8MTL9 139 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 SEC11BP0C7V7 166 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 CRIP1P50238 77 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 FGF8P55075 233 aaPredicted RBP7.28□□□□□ -1.24
CCDC60-202ENST00000535685 LELP1Q5T871 98 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 KCNRGQ8N5I3 272 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 NHLRC2Q8NBF2 726 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 STOML3Q8TAV4 291 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 MAP1LC3BQ9GZQ8 125 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 TNFRSF18Q9Y5U5 241 aa7.28□□□□□ -1.24
CCDC60-202ENST00000535685 A0A087WTM6 91 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 IBA57-AS1B1ANH7 110 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 UMAD1C9J7I0 102 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 CRYGDP07320 174 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 LINC00694P0DN24 101 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 S100A4P26447 101 aaKnown RBP7.27□□□□□ -1.25
CCDC60-202ENST00000535685 ASIPP42127 132 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 UBE2G2P60604 165 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 ZNF674Q2M3X9 581 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 UFSP1Q6NVU6 142 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 Q6ZNX1 250 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 Q8N1X5 172 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms