RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 OR7C2O60412 319 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 LINC00694P0DN24 101 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 FUSP35637 526 aaKnown RBP eCLIP7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 UBE2L3P68036 154 aaKnown RBP7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 MUC21Q5SSG8 566 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 ALKAL2Q6UX46 152 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 SLC25A29Q8N8R3 303 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 CYTL1Q9NRR1 136 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 OR5AC2Q9NZP5 309 aa7.46□□□□□ -1.22
CLSTN3-206ENST00000535668 TRAV8-6A0A0B4J262 113 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 FBLL1A6NHQ2 334 aaKnown RBP7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 GNRH2O43555 120 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 TYMSP04818 313 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 SULT1A2P50226 295 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 RHOHQ15669 191 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 CFAP126Q5VTH2 177 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 DPPA3Q6W0C5 159 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 TM2D2Q9BX73 214 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 SDF2L1Q9HCN8 221 aa7.45□□□□□ -1.22
CLSTN3-206ENST00000535668 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 MGST1P10620 155 aaKnown RBP7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 TOR2AQ5JU69 321 aa7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 PRADC1Q9BSG0 188 aa7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 GTSF1LQ9H1H1 148 aa7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
CLSTN3-206ENST00000535668 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 LOC100131303A0A0U1RQF7 123 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 PGPA6NDG6 321 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 ZNF876PQ49A33 203 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 FFAR4Q5NUL3 377 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 OR2G3Q8NGZ4 309 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 LYPD6BQ8NI32 183 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 CMTM2Q8TAZ6 248 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 TREM1Q9NP99 234 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 COX11Q9Y6N1 276 aa7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-206ENST00000535668 HMCN2Q8NDA2 5059 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 PSCAO43653 123 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 NDUFS6O75380 124 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 RAB2AP61019 212 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 UFSP1Q6NVU6 142 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 C11orf21Q9P2W6 132 aa7.42□□□□□ -1.22
CLSTN3-206ENST00000535668 A0A087WWC5 75 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 STAG3L2P0CL84 134 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 STAG3L3P0CL85 134 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 RNASE3P12724 160 aaKnown RBP7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 PPT1P50897 306 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 DNLZQ5SXM8 178 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 GOLT1AQ6ZVE7 132 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 COX8CQ7Z4L0 72 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 C5orf17Q8NAS9 161 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 NHLRC2Q8NBF2 726 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
CLSTN3-206ENST00000535668 TRAV8-1A0A0A6YYK1 113 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 TCRAP04437 139 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 OR10J3Q5JRS4 329 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 ATRAIDQ6UW56 229 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 SVBPQ8N300 66 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 SCGB1C1Q8TD33 95 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 SEC11CQ9BY50 192 aa7.4□□□□□ -1.22
CLSTN3-206ENST00000535668 TMEM218A2RU14 115 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 A8MWV9 139 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 TAGLN2P37802 199 aaKnown RBP7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 ZNF80P51504 273 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 SERF2P84101 59 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 PEA15Q15121 130 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 ZNF506Q5JVG8 444 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 SAPCD1Q5SSQ6 148 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 C10orf91Q5T1B1 145 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 RPL7L1Q6DKI1 246 aaKnown RBP7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 TMEM75Q8N9X5 138 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 OR10G9Q8NGN4 311 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 NDFIP1Q9BT67 221 aa7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 PSMG3Q9BT73 122 aaPredicted RBP7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 CARHSP1Q9Y2V2 147 aaKnown RBP7.39□□□□□ -1.23
CLSTN3-206ENST00000535668 TRAV1-1A0A0B4J248 108 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 SNAPINO95295 136 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 OXTP01178 125 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 FGF8P55075 233 aaPredicted RBP7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 WFDC2Q14508 124 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 SERTAD4-AS1Q5TG53 156 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 IL36BQ9NZH7 164 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 NAGKQ9UJ70 344 aa7.38□□□□□ -1.23
CLSTN3-206ENST00000535668 PGPEP1LA6NFU8 196 aa7.37□□□□□ -1.23
CLSTN3-206ENST00000535668 J3QL48 77 aa7.37□□□□□ -1.23
CLSTN3-206ENST00000535668 K7EQM0 130 aa7.37□□□□□ -1.23
CLSTN3-206ENST00000535668 MBP02144 154 aa7.37□□□□□ -1.23
CLSTN3-206ENST00000535668 SMUG1Q53HV7 270 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms