RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 AZU1P20160 251 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 DUX5Q96PT3 197 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 RNF5Q99942 180 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 COL25A1Q9BXS0 654 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 F5H697 171 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 PHLDA1Q8WV24 401 aaPredicted RBP10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 PHLDA3Q9Y5J5 127 aa10.56□□□□□ -0.72
LPCAT3-203ENST00000535479 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 SLC25A16P16260 332 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 SCGB1D4Q6XE38 83 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 ZFP2Q6ZN57 461 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 MAPK1IP1LQ8NDC0 245 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 RASL10AQ92737 203 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 C19orf84I3L1E1 186 aa10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 RPS20P60866 119 aaKnown RBP10.55□□□□□ -0.72
LPCAT3-203ENST00000535479 K7ENP7 123 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 PF4V1P10720 104 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 NRGNQ92686 78 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 CCDC144NLQ6NUI1 221 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 SIRPDQ9H106 197 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
LPCAT3-203ENST00000535479 GPHB5Q86YW7 130 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 FAM110DQ8TAY7 271 aaPredicted RBP10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 M0R1W7 72 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 IGHV4-38-2P0DP08 117 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 C20orf78Q9BR46 151 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 PRADC1Q9BSG0 188 aa10.53□□□□□ -0.72
LPCAT3-203ENST00000535479 TRAV12-3A0A0B4J271 114 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 ZNF815PA8K554 130 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 SRSF9Q13242 221 aaKnown RBP eCLIP10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 C2orf66Q6UXQ4 117 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 ZMAT4Q9H898 229 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 ZNF580Q9UK33 172 aa10.52□□□□□ -0.72
LPCAT3-203ENST00000535479 A0A087WX48 190 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 CENPVL3A0A0U1RRI6 287 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 PSMB2P49721 201 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 C11orf71Q6IPW1 123 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 EEF1AKMT3Q96AZ1 226 aa10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 SPAG8Q99932 426 aaPredicted RBP10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 SRSF8Q9BRL6 282 aaKnown RBP10.52□□□□□ -0.73
LPCAT3-203ENST00000535479 A0A1B0GWB2 263 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 OR11H12B2RN74 326 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 SRSF1Q07955 248 aaKnown RBP eCLIP10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 OR11H2Q8NH07 326 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 SAMD13Q5VXD3 122 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 KLK9Q9UKQ9 250 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
LPCAT3-203ENST00000535479 ANKRD17O75179 2603 aaKnown RBP10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 ZNF469Q96JG9 3925 aaPredicted RBP10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 NPFFO15130 113 aa10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 BAALCQ8WXS3 180 aa10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 IGSF10Q6WRI0 2623 aa10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
LPCAT3-203ENST00000535479 NPC2P61916 151 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 TMEM170BQ5T4T1 132 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 C5orf56Q8N8D9 126 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 ATP5LO75964 103 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
LPCAT3-203ENST00000535479 C11orf86A6NJI1 115 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 H3BUX3 64 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 SIVA1O15304 175 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 TSPEAR-AS2P59090 65 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 OR5A1Q8NGJ0 315 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 PIEZO1Q92508 2521 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 RAX2Q96IS3 184 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 SLC50A1Q9BRV3 221 aa10.48□□□□□ -0.73
LPCAT3-203ENST00000535479 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 F8VRH5 84 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 LMO4P61968 165 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 OR10J6PQ8NGY7 276 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 E9PLD3 99 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 H7C1H1 209 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 SCGB2A1O75556 95 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 CD7P09564 240 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 ASIPP42127 132 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 UBE2E1P51965 193 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 BEX4Q9NWD9 120 aaPredicted RBP10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 Q9UF83 564 aa10.47□□□□□ -0.73
LPCAT3-203ENST00000535479 GAGE12HA6NDE8 117 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms