RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PRADC1Q9BSG0 188 aa14.71□□□□□ -0.05
SMPD1-210ENST00000534405 SHANK2-AS3Q9BTD1 123 aa14.71□□□□□ -0.05
SMPD1-210ENST00000534405 C21orf62Q9NYP8 219 aa14.71□□□□□ -0.05
SMPD1-210ENST00000534405 DPM3Q9P2X0 92 aa14.71□□□□□ -0.05
SMPD1-210ENST00000534405 IGF2RP11717 2491 aa14.71□□□□□ -0.06
SMPD1-210ENST00000534405 COX6B1P14854 86 aa14.71□□□□□ -0.06
SMPD1-210ENST00000534405 ZNF491Q8N8L2 437 aa14.71□□□□□ -0.06
SMPD1-210ENST00000534405 ATRXP46100 2492 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 H3BRN7 92 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 CFC1BP0CG36 223 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 CFC1P0CG37 223 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 NTN5Q8WTR8 489 aaPredicted RBP14.7□□□□□ -0.06
SMPD1-210ENST00000534405 PRR25Q96S07 402 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 M0R3E3 92 aa14.7□□□□□ -0.06
SMPD1-210ENST00000534405 SMIM9A6NGZ8 99 aa14.69□□□□□ -0.06
SMPD1-210ENST00000534405 DUSP14O95147 198 aaKnown RBP14.69□□□□□ -0.06
SMPD1-210ENST00000534405 CRIP2P52943 208 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-210ENST00000534405 ADORA2A-AS1P86434 159 aa14.69□□□□□ -0.06
SMPD1-210ENST00000534405 SRSF2Q01130 221 aaKnown RBP14.69□□□□□ -0.06
SMPD1-210ENST00000534405 PSMG3-AS1Q96PY0 264 aa14.69□□□□□ -0.06
SMPD1-210ENST00000534405 LINC00694P0DN24 101 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 EFNA4P52798 201 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 RNF125Q96EQ8 232 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 MRPS12O15235 138 aaKnown RBP14.68□□□□□ -0.06
SMPD1-210ENST00000534405 HLA-DMBP28068 263 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 NPBQ8NG41 125 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 CHCHD5Q9BSY4 110 aa14.68□□□□□ -0.06
SMPD1-210ENST00000534405 TRAV2A0A0B4J234 112 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 PF4V1P10720 104 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 DTX2Q86UW9 622 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 C3orf56Q8N813 242 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 SVEP1Q4LDE5 3571 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 ODF3BA8MYP8 253 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 NDPQ00604 133 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 HES1Q14469 280 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 DYNAPQ8N1N2 210 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 FANCD2OSQ96PS1 177 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 PRO1854Q9UHT4 67 aa14.67□□□□□ -0.06
SMPD1-210ENST00000534405 TRAV25A0A0B4J276 109 aa14.66□□□□□ -0.06
SMPD1-210ENST00000534405 NEXN-AS1Q8NBZ9 246 aa14.66□□□□□ -0.06
SMPD1-210ENST00000534405 MED13LQ71F56 2210 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 F8W735 103 aaPredicted RBP14.65□□□□□ -0.06
SMPD1-210ENST00000534405 SLC25A16P16260 332 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 TRPT1Q86TN4 253 aaKnown RBP14.65□□□□□ -0.06
SMPD1-210ENST00000534405 NRACQ8N912 160 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 BAALCQ8WXS3 180 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 A0A0J9YY99 117 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 C11orf71Q6IPW1 123 aa14.65□□□□□ -0.06
SMPD1-210ENST00000534405 M0R2P5 195 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 IGHV3-30P01768 117 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 IGHV3-30-5P0DP03 117 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 ZNF80P51504 273 aaPredicted RBP14.64□□□□□ -0.07
SMPD1-210ENST00000534405 TIMD4Q96H15 378 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 WNK2Q9Y3S1 2297 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 IGLV11-55A0A075B6I3 123 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 TRBV7-7A0A0K0K1E9 115 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 LGALS9O00182 355 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 LRRC75A-AS1Q8N1F1 130 aa14.64□□□□□ -0.07
SMPD1-210ENST00000534405 M0R1W7 72 aa14.63□□□□□ -0.07
SMPD1-210ENST00000534405 P0DMU3 169 aa14.63□□□□□ -0.07
SMPD1-210ENST00000534405 FAM231AP0DMU4 169 aa14.63□□□□□ -0.07
SMPD1-210ENST00000534405 FAM231CP0DMU5 169 aa14.63□□□□□ -0.07
SMPD1-210ENST00000534405 PDE6HQ13956 83 aa14.63□□□□□ -0.07
SMPD1-210ENST00000534405 TEX49A0A1B0GTD5 131 aa14.62□□□□□ -0.07
SMPD1-210ENST00000534405 IGHV3-23P01764 117 aa14.62□□□□□ -0.07
SMPD1-210ENST00000534405 COL6A6A6NMZ7 2263 aa14.61□□□□□ -0.07
SMPD1-210ENST00000534405 LOC107984640A0A0U1RRK4 108 aa14.61□□□□□ -0.07
SMPD1-210ENST00000534405 IL17RELQ6ZVW7 336 aa14.61□□□□□ -0.07
SMPD1-210ENST00000534405 VMO1Q7Z5L0 202 aa14.61□□□□□ -0.07
SMPD1-210ENST00000534405 MSRB2Q9Y3D2 182 aa14.61□□□□□ -0.07
SMPD1-210ENST00000534405 NDUFA7O95182 113 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 RPL7P18124 248 aaKnown RBP14.6□□□□□ -0.07
SMPD1-210ENST00000534405 ZFP36P26651 326 aaKnown RBP14.6□□□□□ -0.07
SMPD1-210ENST00000534405 LINC01620Q4KN68 170 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 SCGB3A1Q96QR1 104 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 A0A1B0GX51 115 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 H3BMM0 161 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 MFAP4P55083 255 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 KLHL30-AS1Q8NEE0 82 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 UBE2WQ96B02 151 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 TOMM6Q96B49 74 aa14.6□□□□□ -0.07
SMPD1-210ENST00000534405 ASH1LQ9NR48 2969 aaKnown RBP14.59□□□□□ -0.07
SMPD1-210ENST00000534405 IGKV2-40A0A087WW87 121 aaPredicted RBP14.59□□□□□ -0.07
SMPD1-210ENST00000534405 FAM240AA0A1B0GVK7 77 aa14.59□□□□□ -0.07
SMPD1-210ENST00000534405 A0A1W2PPR1 153 aa14.59□□□□□ -0.07
SMPD1-210ENST00000534405 J3KT08 172 aa14.59□□□□□ -0.07
SMPD1-210ENST00000534405 IGKV2D-40P01614 121 aaPredicted RBP14.59□□□□□ -0.07
SMPD1-210ENST00000534405 ATXN8Q156A1 80 aa14.59□□□□□ -0.07
SMPD1-210ENST00000534405 Q8N6K4 173 aa14.59□□□□□ -0.07
SMPD1-210ENST00000534405 SPTBN1Q01082 2364 aaKnown RBP14.59□□□□□ -0.07
SMPD1-210ENST00000534405 TRBV10-2A0A0K0K1G8 114 aa14.58□□□□□ -0.07
SMPD1-210ENST00000534405 NPFFO15130 113 aa14.58□□□□□ -0.07
SMPD1-210ENST00000534405 IGHV3-33P01772 117 aa14.58□□□□□ -0.07
SMPD1-210ENST00000534405 ORM1P02763 201 aa14.58□□□□□ -0.07
SMPD1-210ENST00000534405 FAM19A5Q7Z5A7 132 aaPredicted RBP14.58□□□□□ -0.07
SMPD1-210ENST00000534405 SLC25A29Q8N8R3 303 aa14.58□□□□□ -0.08
SMPD1-210ENST00000534405 KLRB1Q12918 225 aa14.57□□□□□ -0.08
SMPD1-210ENST00000534405 ERCC8Q13216 396 aa14.57□□□□□ -0.08
SMPD1-210ENST00000534405 EBI3Q14213 229 aa14.57□□□□□ -0.08
SMPD1-210ENST00000534405 C3orf22Q8N5N4 141 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms