RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 SFTA3P0C7M3 94 aa10.66□□□□□ -0.7
UBXN1-217ENST00000534176 MGST1P10620 155 aaKnown RBP10.66□□□□□ -0.7
UBXN1-217ENST00000534176 TIRAPP58753 221 aa10.66□□□□□ -0.7
UBXN1-217ENST00000534176 RHOHQ15669 191 aa10.66□□□□□ -0.7
UBXN1-217ENST00000534176 ZFP2Q6ZN57 461 aa10.66□□□□□ -0.7
UBXN1-217ENST00000534176 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
UBXN1-217ENST00000534176 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 A0A1B0GVY2 172 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 B4DEV8 164 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 RS1O15537 224 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 PAGE4O60829 102 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 C1QBP02746 253 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 GYPEP15421 78 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 GATA1P15976 413 aaPredicted RBP10.65□□□□□ -0.7
UBXN1-217ENST00000534176 LYPD5Q6UWN5 251 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 C11orf21Q9P2W6 132 aa10.65□□□□□ -0.7
UBXN1-217ENST00000534176 RNASE3P12724 160 aaKnown RBP10.64□□□□□ -0.71
UBXN1-217ENST00000534176 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
UBXN1-217ENST00000534176 CFAP126Q5VTH2 177 aa10.64□□□□□ -0.71
UBXN1-217ENST00000534176 SLC51BQ86UW2 128 aa10.64□□□□□ -0.71
UBXN1-217ENST00000534176 HECTD4Q9Y4D8 3996 aa10.64□□□□□ -0.71
UBXN1-217ENST00000534176 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 RHODO00212 210 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 NXPH4O95158 308 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 TAGLN2P37802 199 aaKnown RBP10.63□□□□□ -0.71
UBXN1-217ENST00000534176 LINC01559Q495D7 138 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 ZNF506Q5JVG8 444 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 Q6ZNX1 250 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
UBXN1-217ENST00000534176 KRBOX1C9JBD0 128 aa10.62□□□□□ -0.71
UBXN1-217ENST00000534176 IFNA1P01562 189 aa10.62□□□□□ -0.71
UBXN1-217ENST00000534176 CXCL1P09341 107 aa10.62□□□□□ -0.71
UBXN1-217ENST00000534176 C10orf126Q8N4M7 172 aa10.62□□□□□ -0.71
UBXN1-217ENST00000534176 LY96Q9Y6Y9 160 aa10.62□□□□□ -0.71
UBXN1-217ENST00000534176 SH2D1AO60880 128 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 EVI2AP22794 236 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 SULT1A2P50226 295 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 AKAP14Q86UN6 197 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 NHLRC2Q8NBF2 726 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 SMIM12Q96EX1 92 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 PHLDA3Q9Y5J5 127 aa10.61□□□□□ -0.71
UBXN1-217ENST00000534176 PGPEP1LA6NFU8 196 aa10.6□□□□□ -0.71
UBXN1-217ENST00000534176 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
UBXN1-217ENST00000534176 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
UBXN1-217ENST00000534176 TRAV8-6A0A0B4J262 113 aa10.59□□□□□ -0.71
UBXN1-217ENST00000534176 PDE6DO43924 150 aa10.59□□□□□ -0.71
UBXN1-217ENST00000534176 CRIP1P50238 77 aa10.59□□□□□ -0.71
UBXN1-217ENST00000534176 ZFP82Q8N141 532 aa10.59□□□□□ -0.71
UBXN1-217ENST00000534176 SCO2A0A1W2PP80 73 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 H3BVH4 76 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 ARMS2P0C7Q2 107 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 DNAH10OSP0CZ25 163 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 C11orf52Q96A22 123 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 MLST8Q9BVC4 326 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 PARLQ9H300 379 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 BIN3Q9NQY0 253 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 GNG13Q9P2W3 67 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 DNAH2Q9P225 4427 aa10.58□□□□□ -0.72
UBXN1-217ENST00000534176 A0A1B0GV50 99 aa10.57□□□□□ -0.72
UBXN1-217ENST00000534176 M0R036 132 aa10.57□□□□□ -0.72
UBXN1-217ENST00000534176 EREGO14944 169 aa10.57□□□□□ -0.72
UBXN1-217ENST00000534176 SCRT2Q9NQ03 307 aa10.57□□□□□ -0.72
UBXN1-217ENST00000534176 A0A087WWC5 75 aa10.56□□□□□ -0.72
UBXN1-217ENST00000534176 MEF2BQ02080 365 aaPredicted RBP10.56□□□□□ -0.72
UBXN1-217ENST00000534176 TNP2Q05952 138 aa10.56□□□□□ -0.72
UBXN1-217ENST00000534176 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
UBXN1-217ENST00000534176 GTSF1LQ9H1H1 148 aa10.56□□□□□ -0.72
UBXN1-217ENST00000534176 FAT2Q9NYQ8 4349 aa10.56□□□□□ -0.72
UBXN1-217ENST00000534176 IGHV3-38A0A0C4DH36 116 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 RPL35P42766 123 aaKnown RBP10.55□□□□□ -0.72
UBXN1-217ENST00000534176 LINC00315P59091 139 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 LELP1Q5T871 98 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 SFRP2Q96HF1 295 aa10.55□□□□□ -0.72
UBXN1-217ENST00000534176 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
UBXN1-217ENST00000534176 XKRY2A2RUG3 117 aa10.54□□□□□ -0.72
UBXN1-217ENST00000534176 LINC01556Q5JQF7 62 aa10.54□□□□□ -0.72
UBXN1-217ENST00000534176 DAZAP1Q96EP5 407 aaKnown RBP10.54□□□□□ -0.72
UBXN1-217ENST00000534176 KRTAP17-1Q9BYP8 105 aa10.54□□□□□ -0.72
UBXN1-217ENST00000534176 VAX2Q9UIW0 290 aa10.54□□□□□ -0.72
UBXN1-217ENST00000534176 IGHV3-73A0A0B4J1V6 119 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 OR5AL1P0C617 328 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 BCL2P10415 239 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 RPS20P60866 119 aaKnown RBP10.53□□□□□ -0.72
UBXN1-217ENST00000534176 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 CCL20P78556 96 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 UFSP1Q6NVU6 142 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.53□□□□□ -0.72
UBXN1-217ENST00000534176 MSRB1Q9NZV6 116 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 DNAH17Q9UFH2 4485 aa10.53□□□□□ -0.72
UBXN1-217ENST00000534176 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 M0R381 172 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 CRYGDP07320 174 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 GNG4P50150 75 aa10.52□□□□□ -0.73
UBXN1-217ENST00000534176 ERVFC1-1P60608 527 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms