RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 LYPD1Q8N2G4 141 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 WFDC9Q8NEX5 89 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 BLNKQ8WV28 456 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 MS4A6AQ9H2W1 248 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 Q9H3A6 140 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 SELENOKQ9Y6D0 94 aa4.59□□□□□ -1.67
CMTM1-220ENST00000534143 PRKDCP78527 4128 aaKnown RBP4.58□□□□□ -1.68
CMTM1-220ENST00000534143 TRAV2A0A0B4J234 112 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 TRAV25A0A0B4J276 109 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 K7EQG2 157 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 IGLV1-51P01701 117 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 C3orf79P0CE67 100 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 HLA-DMBP28068 263 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 GNG4P50150 75 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 PSG9Q00887 426 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 PSG3Q16557 428 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 TMEM61Q8N0U2 210 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 EXOC3-AS1Q8N2X6 119 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 DEFB125Q8N687 156 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 DCANP1Q8TF63 244 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 SLC50A1Q9BRV3 221 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 TMEM70Q9BUB7 260 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 OTORQ9NRC9 128 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 OSTCQ9NRP0 149 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 WNK1Q9H4A3 2382 aa4.58□□□□□ -1.68
CMTM1-220ENST00000534143 IZUMO1RA6ND01 250 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 ISLRO14498 428 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 SLC25A5P05141 298 aaKnown RBP4.57□□□□□ -1.68
CMTM1-220ENST00000534143 OR5AL1P0C617 328 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 SRIP30626 198 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 CD300EQ496F6 205 aaPredicted RBP4.57□□□□□ -1.68
CMTM1-220ENST00000534143 PSMG4Q5JS54 123 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 C5orf17Q8NAS9 161 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 OR2K2Q8NGT1 345 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 DYNLRB2Q8TF09 96 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 C11orf52Q96A22 123 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 MRPL53Q96EL3 112 aaKnown RBP4.57□□□□□ -1.68
CMTM1-220ENST00000534143 MAP1LC3CQ9BXW4 147 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 AAMDCQ9H7C9 122 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 CLEC5AQ9NY25 188 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 HSPB8Q9UJY1 196 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 EPDR1Q9UM22 224 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 ZNF256Q9Y2P7 627 aaPredicted RBP4.57□□□□□ -1.68
CMTM1-220ENST00000534143 PKD1L1Q8TDX9 2849 aa4.57□□□□□ -1.68
CMTM1-220ENST00000534143 IGKV3-7A0A075B6H7 116 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 PRSS47A8MTI9 375 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 M0R3E3 92 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 SAP30O75446 220 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 TCRAP04437 139 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 INSL3P51460 131 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 GNG5P63218 68 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 C9orf66Q5T8R8 295 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 AMMECR1LQ6DCA0 310 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 LCN12Q6JVE5 192 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 RNASEKQ6P5S7 137 aaKnown RBP4.56□□□□□ -1.68
CMTM1-220ENST00000534143 RBPMS2Q6ZRY4 209 aaKnown RBP4.56□□□□□ -1.68
CMTM1-220ENST00000534143 FER1L6-AS1Q8NA97 138 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 CHCHD1Q96BP2 118 aaKnown RBP4.56□□□□□ -1.68
CMTM1-220ENST00000534143 SIGMAR1Q99720 223 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 SPAG8Q99932 426 aaPredicted RBP4.56□□□□□ -1.68
CMTM1-220ENST00000534143 MCRIP2Q9BUT9 160 aaKnown RBP4.56□□□□□ -1.68
CMTM1-220ENST00000534143 MEGF8Q7Z7M0 2845 aa4.56□□□□□ -1.68
CMTM1-220ENST00000534143 OR4C46A6NHA9 309 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 PRAC2D3DTV9 90 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 G3V4G9 280 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 H3BRM9 83 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 PEX7O00628 323 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 NUPR1O60356 82 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 ID1P41134 155 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 TDRG1Q3Y452 100 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 BVES-AS1Q5T3Y7 98 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 ATP5L2Q7Z4Y8 100 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 RNF182Q8N6D2 247 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 TSKUQ8WUA8 353 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 KLF12Q9Y4X4 402 aa4.55□□□□□ -1.68
CMTM1-220ENST00000534143 SORL1Q92673 2214 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 TRBV6-1A0A0K0K1D8 114 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 SERTM2A0A1B0GWG4 89 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 C7orf71A4D174 169 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 TAX1BP3O14907 124 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 ZNF688P0C7X2 276 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
CMTM1-220ENST00000534143 MGST1P10620 155 aaKnown RBP4.54□□□□□ -1.68
CMTM1-220ENST00000534143 FABP2P12104 132 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 IGLL1P15814 213 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 CSN1S1P47710 185 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 DEFB1P60022 68 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 MPV17L2Q567V2 206 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 IBA57Q5T440 356 aaKnown RBP4.54□□□□□ -1.68
CMTM1-220ENST00000534143 TMEM136Q6ZRR5 245 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 C9orf47Q6ZRZ4 202 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 GOLT1AQ6ZVE7 132 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 OCC1Q8TAD7 63 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 LINC00479Q96M42 142 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 FAM110AQ9BQ89 295 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 DERL1Q9BUN8 251 aa4.54□□□□□ -1.68
CMTM1-220ENST00000534143 AGRNO00468 2067 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms