RNA–Protein interactions for RNA: ENST00000533860.5

APLP2-222, Transcript of amyloid beta precursor like protein 2, human

TSL 1 (best)

Gene APLP2, Length 1,424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APLP2-222	ENST00000533860	HBB	P68871	147 aa		11.35	□□□□□ -0.59
APLP2-222	ENST00000533860	FABP9	Q0Z7S8	132 aa		11.35	□□□□□ -0.59
APLP2-222	ENST00000533860	TRGV11	A0A075B6L2	103 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860		F2Z2F3	143 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	PRB2	P02812	416 aa	Predicted RBP	11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	NTF3	P20783	257 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	RIG	Q13278	110 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	GATD1	Q8NB37	220 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	C11orf72	Q8NBR9	251 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	C1QTNF4	Q9BXJ3	329 aa		11.34	□□□□□ -0.59
APLP2-222	ENST00000533860	DNHD1	Q96M86	4753 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	IGHV4-4	A0A075B6R2	117 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	RASL11A	Q6T310	242 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	TMEM256	Q8N2U0	113 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	C12orf57	Q99622	126 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	TMEM208	Q9BTX3	173 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	GNB1L	Q9BYB4	327 aa		11.33	□□□□□ -0.6
APLP2-222	ENST00000533860	NXPH4	O95158	308 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	RAB4B	P61018	213 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	KRTAP21-3	Q3LHN1	58 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	KPRP	Q5T749	579 aa	Predicted RBP	11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	WDR73	Q6P4I2	378 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	FRZB	Q92765	325 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	BORCS7	Q96B45	105 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	MRPL18	Q9H0U6	180 aa	Known RBP	11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	GSN-AS1	Q9NRJ2	163 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	GOLT1B	Q9Y3E0	138 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	TRAPPC1	Q9Y5R8	145 aa		11.32	□□□□□ -0.6
APLP2-222	ENST00000533860	KIR2DL5B	A0A0G2JN68	375 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	KIR2DL5B	A0A0G2JPC4	375 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860		M0R381	172 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	CACNG7	P62955	275 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	SLA	Q13239	276 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	TWIST1	Q15672	202 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	DMRTA1	Q5VZB9	504 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	KIR2DL5A	Q8N109	375 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	KIR2DL5B	Q8NHK3	375 aa		11.31	□□□□□ -0.6
APLP2-222	ENST00000533860	ZMAT5	Q9UDW3	170 aa	Known RBP	11.31	□□□□□ -0.6
APLP2-222	ENST00000533860		A8MZ25	164 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	HOXA5	P20719	270 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	S100A12	P80511	92 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	KIAA1644	Q3SXP7	199 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	SPANXN1	Q5VSR9	72 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	IL17D	Q8TAD2	202 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	RNASE8	Q8TDE3	154 aa	Known RBP	11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	JPT2	Q9H910	190 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	PHLDA3	Q9Y5J5	127 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860		X6R8D5	127 aa		11.3	□□□□□ -0.6
APLP2-222	ENST00000533860	PLAC8L1	A1L4L8	177 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	HLA-DQA1	P01909	254 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	S100A2	P29034	98 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	APOC4	P55056	127 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	NDUFA6	P56556	154 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	ZNF415	Q09FC8	603 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	DEFB135	Q30KP9	77 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	COX19	Q49B96	90 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860	ZNF493	Q6ZR52	646 aa		11.29	□□□□□ -0.6
APLP2-222	ENST00000533860		A0A1B0GW15	77 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BK	O60814	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BJ	P06899	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BO	P23527	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BB	P33778	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BD	P58876	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BC	P62807	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST2H2BE	Q16778	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BH	Q93079	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	RNF185	Q96GF1	192 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BN	Q99877	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860	HIST1H2BM	Q99879	126 aa		11.28	□□□□□ -0.6
APLP2-222	ENST00000533860		K7EIL1	84 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	MT-ND6	P03923	174 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	TRGC1	P0CF51	173 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	EVI2A	P22794	236 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	AMN1	Q8IY45	258 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	TMEM191A	Q9H0A3	160 aa		11.27	□□□□□ -0.6
APLP2-222	ENST00000533860	APCS	P02743	223 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	FAM104B	Q5XKR9	115 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	TMEM263	Q8WUH6	116 aa	Known RBP	11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	RCHY1	Q96PM5	261 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	RRN3P1	Q2M238	152 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	SAMD10	Q9BYL1	202 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	MRPL16	Q9NX20	251 aa	Known RBP	11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	KIF25-AS1	Q9Y6Z4	181 aa		11.26	□□□□□ -0.61
APLP2-222	ENST00000533860	RAB4A	P20338	218 aa		11.25	□□□□□ -0.61
APLP2-222	ENST00000533860	LINC00315	P59091	139 aa		11.25	□□□□□ -0.61
APLP2-222	ENST00000533860	MRPL51	Q4U2R6	128 aa	Known RBP	11.25	□□□□□ -0.61
APLP2-222	ENST00000533860	NOTCH1	P46531	2555 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860		M0R2P5	195 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	GAS8-AS1	O95177	125 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	ZNF876P	Q49A33	203 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	C14orf178	Q8N769	122 aa	Predicted RBP	11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	RNF183	Q96D59	192 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	C16orf74	Q96GX8	76 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	SPX	Q9BT56	116 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	RETN	Q9HD89	108 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	NACA	E9PAV3	2078 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	MGAM2	Q2M2H8	2515 aa		11.24	□□□□□ -0.61
APLP2-222	ENST00000533860	SMKR1	H3BMG3	65 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms