RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 TRAV34A0A0B4J273 112 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 MAP1LC3B2A6NCE7 125 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 FGF8P55075 233 aaPredicted RBP15.92■□□□□ 0.14
SMPD1-209ENST00000533196 ERVFC1-1P60608 527 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 ZNF506Q5JVG8 444 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 DPPA3Q6W0C5 159 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 MAP1LC3BQ9GZQ8 125 aa15.92■□□□□ 0.14
SMPD1-209ENST00000533196 LOC100131303A0A0U1RQF7 123 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 ZNF345Q14585 488 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 COX8CQ7Z4L0 72 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 Q86TA4 180 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 STOML3Q8TAV4 291 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 PGPEP1Q9NXJ5 209 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 MSRB1Q9NZV6 116 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 ZFP30Q9Y2G7 519 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 ABCA13Q86UQ4 5058 aa15.91■□□□□ 0.14
SMPD1-209ENST00000533196 IGKV3D-20A0A0C4DH25 116 aa15.9■□□□□ 0.14
SMPD1-209ENST00000533196 PGPEP1LA6NFU8 196 aa15.9■□□□□ 0.14
SMPD1-209ENST00000533196 MGST1P10620 155 aaKnown RBP15.9■□□□□ 0.14
SMPD1-209ENST00000533196 S100A4P26447 101 aaKnown RBP15.9■□□□□ 0.14
SMPD1-209ENST00000533196 FHITP49789 147 aa15.9■□□□□ 0.14
SMPD1-209ENST00000533196 ASIPP42127 132 aa15.89■□□□□ 0.13
SMPD1-209ENST00000533196 ZFP2Q6ZN57 461 aa15.89■□□□□ 0.13
SMPD1-209ENST00000533196 FMC1Q96HJ9 113 aa15.89■□□□□ 0.13
SMPD1-209ENST00000533196 A8MWV9 139 aa15.88■□□□□ 0.13
SMPD1-209ENST00000533196 CDPF1Q6NVV7 123 aa15.88■□□□□ 0.13
SMPD1-209ENST00000533196 KCNRGQ8N5I3 272 aa15.88■□□□□ 0.13
SMPD1-209ENST00000533196 IL36BQ9NZH7 164 aa15.88■□□□□ 0.13
SMPD1-209ENST00000533196 TNFRSF18Q9Y5U5 241 aa15.88■□□□□ 0.13
SMPD1-209ENST00000533196 TRAV8-6A0A0B4J262 113 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 IGHV3-38A0A0C4DH36 116 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 TRBV6-1A0A0K0K1D8 114 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 CRYGDP07320 174 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 UBE2G1P62253 170 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 DNLZQ5SXM8 178 aa15.87■□□□□ 0.13
SMPD1-209ENST00000533196 HMSDA8MTL9 139 aa15.86■□□□□ 0.13
SMPD1-209ENST00000533196 SEC11BP0C7V7 166 aa15.86■□□□□ 0.13
SMPD1-209ENST00000533196 LINC01556Q5JQF7 62 aa15.86■□□□□ 0.13
SMPD1-209ENST00000533196 PARLQ9H300 379 aa15.86■□□□□ 0.13
SMPD1-209ENST00000533196 IGHV3-73A0A0B4J1V6 119 aa15.85■□□□□ 0.13
SMPD1-209ENST00000533196 B4DEV8 164 aa15.85■□□□□ 0.13
SMPD1-209ENST00000533196 UMAD1C9J7I0 102 aa15.85■□□□□ 0.13
SMPD1-209ENST00000533196 MAPKAPK5-AS1Q8N8E1 139 aa15.85■□□□□ 0.13
SMPD1-209ENST00000533196 A0A0D9SG52 128 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 SMLR1H3BR10 107 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 LGALSLQ3ZCW2 172 aaPredicted RBP15.84■□□□□ 0.13
SMPD1-209ENST00000533196 FAM162BQ5T6X4 162 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 LELP1Q5T871 98 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 ZC2HC1AQ96GY0 325 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 GTSF1LQ9H1H1 148 aa15.84■□□□□ 0.13
SMPD1-209ENST00000533196 A0A087WTM6 91 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 KRBOX1C9JBD0 128 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 CRIP1P50238 77 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 OR10J3Q5JRS4 329 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 CST9LP1Q5W188 147 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 ATP6V0E2Q8NHE4 81 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 MBD3L1Q8WWY6 194 aa15.83■□□□□ 0.12
SMPD1-209ENST00000533196 LTAP01374 205 aa15.82■□□□□ 0.12
SMPD1-209ENST00000533196 SYT8Q8NBV8 401 aa15.82■□□□□ 0.12
SMPD1-209ENST00000533196 SH2D1AO60880 128 aa15.81■□□□□ 0.12
SMPD1-209ENST00000533196 EIF5AP63241 154 aaKnown RBP15.81■□□□□ 0.12
SMPD1-209ENST00000533196 ZNF674Q2M3X9 581 aa15.81■□□□□ 0.12
SMPD1-209ENST00000533196 KRTAP4-5Q9BYR2 181 aa15.81■□□□□ 0.12
SMPD1-209ENST00000533196 KANTRA0A1W2PQU2 76 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 IBA57-AS1B1ANH7 110 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 H3BVH4 76 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 RHODO00212 210 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 S100A9P06702 114 aaKnown RBP15.8■□□□□ 0.12
SMPD1-209ENST00000533196 AKR1C3P42330 323 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 LINC01559Q495D7 138 aa15.8■□□□□ 0.12
SMPD1-209ENST00000533196 BCL2L11O43521 198 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 ARMS2P0C7Q2 107 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 UFSP1Q6NVU6 142 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 Q8N1X5 172 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 OR11H4Q8NGC9 324 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 SFT2D1Q8WV19 159 aa15.79■□□□□ 0.12
SMPD1-209ENST00000533196 ZNF471Q9BX82 626 aaPredicted RBP15.79■□□□□ 0.12
SMPD1-209ENST00000533196 M0R036 132 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 PAGE4O60829 102 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 LINC00694P0DN24 101 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 Q6ZSN1 163 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 FAM213BQ8TBF2 198 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 SCRT2Q9NQ03 307 aa15.78■□□□□ 0.12
SMPD1-209ENST00000533196 DMRTA1Q5VZB9 504 aa15.77■□□□□ 0.12
SMPD1-209ENST00000533196 PHLDA3Q9Y5J5 127 aa15.77■□□□□ 0.12
SMPD1-209ENST00000533196 PFDN1O60925 122 aa15.76■□□□□ 0.11
SMPD1-209ENST00000533196 TPT1P13693 172 aaKnown RBP15.76■□□□□ 0.11
SMPD1-209ENST00000533196 JPT2Q9H910 190 aa15.76■□□□□ 0.11
SMPD1-209ENST00000533196 GRIFINA4D1Z8 144 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 GAGE12JA6NER3 117 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 PSCAO43653 123 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 GAGE1Q13065 139 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 GAGE4Q13068 117 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 GAGE5Q13069 117 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 LAGE3Q14657 143 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 GAGE13Q4V321 117 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 SFRP2Q96HF1 295 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 SAMD10Q9BYL1 202 aa15.75■□□□□ 0.11
SMPD1-209ENST00000533196 A0A087WWC5 75 aa15.74■□□□□ 0.11
SMPD1-209ENST00000533196 ZFP82Q8N141 532 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms