RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 PPDPFLQ8WWR9 84 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 VCX2Q9H322 139 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 HRNRQ86YZ3 2850 aaPredicted RBP11.24□□□□□ -0.61
CAPN1-224ENST00000533129 PRSS29PA6NIE9 313 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 M0R381 172 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 SRSF9Q13242 221 aaKnown RBP eCLIP11.24□□□□□ -0.61
CAPN1-224ENST00000533129 Q6ZQT7 251 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 DPH3P1Q9H4G8 78 aa11.24□□□□□ -0.61
CAPN1-224ENST00000533129 SPTBN1Q01082 2364 aaKnown RBP11.24□□□□□ -0.61
CAPN1-224ENST00000533129 LOC107984156A0A0G2JMH3 177 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 ARL17AQ8IVW1 177 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 MINOS1Q5TGZ0 78 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 Q6ZUT4 128 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 Q8N9W7 124 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 METTL26Q96S19 204 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 MINOS1-NBL1R4GNA1 71 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
CAPN1-224ENST00000533129 RNF223E7ERA6 249 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 FHL3Q13643 280 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 Q5PR19 223 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 PRR9Q5T870 116 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 RPL39LQ96EH5 51 aaKnown RBP11.22□□□□□ -0.61
CAPN1-224ENST00000533129 CACNA1BQ00975 2339 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 TRBV20-1A0A075B6N2 111 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 MT-ATP8P03928 68 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 U3KQE9 123 aa11.22□□□□□ -0.61
CAPN1-224ENST00000533129 IGHV3OR16-13A0A075B7E8 117 aa11.21□□□□□ -0.61
CAPN1-224ENST00000533129 IGHV3-74A0A0B4J1X5 117 aa11.21□□□□□ -0.61
CAPN1-224ENST00000533129 XGP55808 180 aa11.21□□□□□ -0.61
CAPN1-224ENST00000533129 NDUFA11Q86Y39 141 aa11.21□□□□□ -0.61
CAPN1-224ENST00000533129 SBSPONQ8IVN8 264 aa11.21□□□□□ -0.61
CAPN1-224ENST00000533129 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 PPP1R17O96001 155 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 ECSCRQ19T08 205 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 PAPPA-AS1Q5QFB9 102 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 CARD19Q96LW7 228 aa11.21□□□□□ -0.62
CAPN1-224ENST00000533129 HERVK_113P61574 105 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 A0A0J9YY99 117 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 EEF1AKMT3Q96AZ1 226 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 CCL19Q99731 98 aa11.2□□□□□ -0.62
CAPN1-224ENST00000533129 IGHV1-69DA0A0B4J2H0 117 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 C9orf139Q6ZV77 190 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 C14orf178Q8N769 122 aaPredicted RBP11.19□□□□□ -0.62
CAPN1-224ENST00000533129 C16orf92Q96LL3 132 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 LRBAP50851 2863 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 IGHV3-49A0A0A0MS15 119 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 IGHV4-39P01824 125 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 ASIPP42127 132 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 SFTA2Q6UW10 78 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 PTH2Q96A98 100 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 BPESC1Q9GZL8 116 aa11.19□□□□□ -0.62
CAPN1-224ENST00000533129 TRBV7-1A0A0A6YYK4 115 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 ATP6V0E1O15342 81 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 TCL1BO95988 128 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 CRYGDP07320 174 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 KLHL30-AS1Q8NEE0 82 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 PHLDA3Q9Y5J5 127 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 IGLV4-69A0A075B6H9 119 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 A8MWV9 139 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 S100A4P26447 101 aaKnown RBP11.18□□□□□ -0.62
CAPN1-224ENST00000533129 ZFAND2AQ8N6M9 145 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 WFDC12Q8WWY7 111 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 LINC00477Q96M19 166 aa11.18□□□□□ -0.62
CAPN1-224ENST00000533129 C11orf86A6NJI1 115 aa11.17□□□□□ -0.62
CAPN1-224ENST00000533129 MGPP08493 103 aa11.17□□□□□ -0.62
CAPN1-224ENST00000533129 ZNF688P0C7X2 276 aa11.17□□□□□ -0.62
CAPN1-224ENST00000533129 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
CAPN1-224ENST00000533129 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
CAPN1-224ENST00000533129 POM121L12Q8N7R1 296 aa11.17□□□□□ -0.62
CAPN1-224ENST00000533129 DUSP14O95147 198 aaKnown RBP11.16□□□□□ -0.62
CAPN1-224ENST00000533129 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 IGF1P05019 195 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 LMO4P61968 165 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 GPHB5Q86YW7 130 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 DOPEY1Q5JWR5 2465 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 CFC1BP0CG36 223 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 CFC1P0CG37 223 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 SLC25A29Q8N8R3 303 aa11.16□□□□□ -0.62
CAPN1-224ENST00000533129 TSHBP01222 138 aa11.15□□□□□ -0.62
CAPN1-224ENST00000533129 PMVKQ15126 192 aa11.15□□□□□ -0.62
CAPN1-224ENST00000533129 PIMREGQ9BSJ6 248 aa11.15□□□□□ -0.62
CAPN1-224ENST00000533129 IGIPA6NJ69 53 aa11.15□□□□□ -0.63
CAPN1-224ENST00000533129 TMEM262E9PQX1 116 aa11.15□□□□□ -0.63
CAPN1-224ENST00000533129 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.63
CAPN1-224ENST00000533129 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
CAPN1-224ENST00000533129 LINC01548A6NM66 108 aa11.14□□□□□ -0.63
CAPN1-224ENST00000533129 M0QXV9 152 aa11.14□□□□□ -0.63
CAPN1-224ENST00000533129 OVOL1O14753 267 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms