RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 K7EN84 100 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 FAM3BP58499 235 aaPredicted RBP11.7□□□□□ -0.54
PKP3-209ENST00000533069 ERVFC1-1P60608 527 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
PKP3-209ENST00000533069 ZC2HC1AQ96GY0 325 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 SFRP2Q96HF1 295 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 TMEM242Q9NWH2 141 aa11.7□□□□□ -0.54
PKP3-209ENST00000533069 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 PGPEP1LA6NFU8 196 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 GAGE7O76087 117 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 P01737 135 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 GAGE12FP0CL80 117 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 GAGE12GP0CL81 117 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 GAGE12IP0CL82 117 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 CT83Q5H943 113 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 PRR9Q5T870 116 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 NHLRC2Q8NBF2 726 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 C11orf72Q8NBR9 251 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
PKP3-209ENST00000533069 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 RPS20P60866 119 aaKnown RBP11.68□□□□□ -0.54
PKP3-209ENST00000533069 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 KCNS1Q96KK3 526 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 C18orf15Q96N68 181 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 GSN-AS1Q9NRJ2 163 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
PKP3-209ENST00000533069 TCL1AP56279 114 aa11.67□□□□□ -0.54
PKP3-209ENST00000533069 LGALS9BQ3B8N2 356 aa11.67□□□□□ -0.54
PKP3-209ENST00000533069 FRAS1Q86XX4 4008 aa11.67□□□□□ -0.54
PKP3-209ENST00000533069 FAM231BA6NCW3 169 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 GATCO43716 136 aaKnown RBP11.66□□□□□ -0.54
PKP3-209ENST00000533069 NUDT3O95989 172 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 CXCL1P09341 107 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 OR5I1Q13606 314 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 LINC01559Q495D7 138 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 Q6ZTI0 123 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 LINC00336Q6ZUF6 198 aa11.66□□□□□ -0.54
PKP3-209ENST00000533069 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 C7orf77A4D0Y5 90 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 SPINK4O60575 86 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 SH2D1AO60880 128 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 NUDT10Q8NFP7 164 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 NUDT11Q96G61 164 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
PKP3-209ENST00000533069 RPP21Q9H633 154 aaKnown RBP11.65□□□□□ -0.54
PKP3-209ENST00000533069 TRAV26-1A0A087WT03 109 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 TRGV1A0A0A0MS02 117 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 A8MWL6 223 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 H3BNG1 76 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 CRIP1P50238 77 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
PKP3-209ENST00000533069 CCL18P55774 89 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 TDRG1Q3Y452 100 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
PKP3-209ENST00000533069 RPS10P5Q9NQ39 176 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
PKP3-209ENST00000533069 M0R2N4 97 aa11.63□□□□□ -0.55
PKP3-209ENST00000533069 HOXA5P20719 270 aa11.63□□□□□ -0.55
PKP3-209ENST00000533069 Q6ZQT7 251 aa11.63□□□□□ -0.55
PKP3-209ENST00000533069 BTF3L4Q96K17 158 aa11.63□□□□□ -0.55
PKP3-209ENST00000533069 TP53TG3Q9ULZ0 132 aa11.63□□□□□ -0.55
PKP3-209ENST00000533069 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 TRGV11A0A075B6L2 103 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 A0A1W2PPQ1 181 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 ORM1P02763 201 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 S100PP25815 95 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
PKP3-209ENST00000533069 KCNIP4Q6PIL6 250 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 Q6ZR54 194 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 OR2D3Q8NGH3 330 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 TSKUQ8WUA8 353 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 V9GYV3 84 aa11.62□□□□□ -0.55
PKP3-209ENST00000533069 TRAV9-1A0A075B6T8 112 aa11.61□□□□□ -0.55
PKP3-209ENST00000533069 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
PKP3-209ENST00000533069 DNLZQ5SXM8 178 aa11.61□□□□□ -0.55
PKP3-209ENST00000533069 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
PKP3-209ENST00000533069 SMCO4Q9NRQ5 59 aa11.6□□□□□ -0.55
PKP3-209ENST00000533069 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
PKP3-209ENST00000533069 A0A0J9YY99 117 aa11.59□□□□□ -0.55
PKP3-209ENST00000533069 FOXA3P55318 350 aaPredicted RBP11.59□□□□□ -0.55
PKP3-209ENST00000533069 ZNRF2Q8NHG8 242 aa11.59□□□□□ -0.55
PKP3-209ENST00000533069 SPXQ9BT56 116 aa11.59□□□□□ -0.55
PKP3-209ENST00000533069 MRPL16Q9NX20 251 aaKnown RBP11.59□□□□□ -0.55
PKP3-209ENST00000533069 NAT8BQ9UHF3 227 aa11.59□□□□□ -0.55
PKP3-209ENST00000533069 LINC00588Q9Y4M8 146 aa11.59□□□□□ -0.55
PKP3-209ENST00000533069 F2Z2F3 143 aa11.58□□□□□ -0.56
PKP3-209ENST00000533069 ASIPP42127 132 aa11.58□□□□□ -0.56
PKP3-209ENST00000533069 NAGKQ9UJ70 344 aa11.58□□□□□ -0.56
PKP3-209ENST00000533069 IGKV3D-20A0A0C4DH25 116 aa11.57□□□□□ -0.56
PKP3-209ENST00000533069 SMIM27A0A1W2PRY6 76 aa11.57□□□□□ -0.56
PKP3-209ENST00000533069 RTL8CO15255 209 aa11.57□□□□□ -0.56
PKP3-209ENST00000533069 S100A4P26447 101 aaKnown RBP11.57□□□□□ -0.56
PKP3-209ENST00000533069 SLAQ13239 276 aa11.57□□□□□ -0.56
PKP3-209ENST00000533069 BORCS7Q96B45 105 aa11.57□□□□□ -0.56
PKP3-209ENST00000533069 MDFICQ9P1T7 246 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms