RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 LINC00588Q9Y4M8 146 aa10.69□□□□□ -0.7
CPSF1-210ENST00000532935 PAGE4O60829 102 aa10.68□□□□□ -0.7
CPSF1-210ENST00000532935 CST9LP1Q5W188 147 aa10.68□□□□□ -0.7
CPSF1-210ENST00000532935 Q86TA4 180 aa10.68□□□□□ -0.7
CPSF1-210ENST00000532935 TCEAL7Q9BRU2 100 aa10.68□□□□□ -0.7
CPSF1-210ENST00000532935 M0R2P5 195 aa10.67□□□□□ -0.7
CPSF1-210ENST00000532935 PNRC1Q12796 327 aaPredicted RBP10.67□□□□□ -0.7
CPSF1-210ENST00000532935 FHL2Q14192 279 aa10.67□□□□□ -0.7
CPSF1-210ENST00000532935 Q6ZR54 194 aa10.67□□□□□ -0.7
CPSF1-210ENST00000532935 ZNRF2Q8NHG8 242 aa10.67□□□□□ -0.7
CPSF1-210ENST00000532935 A0A096LPF7 62 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 PAX4O43316 350 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 SLAQ13239 276 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 ZNF479Q96JC4 524 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 PRO0255Q9UI72 69 aa10.66□□□□□ -0.7
CPSF1-210ENST00000532935 TRGV4A0A0C4DH28 118 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 CRYBA4P53673 196 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 ESRGQ1W209 222 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 C11orf52Q96A22 123 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 PKD1P98161 4303 aa10.65□□□□□ -0.7
CPSF1-210ENST00000532935 TRAV4A0A0B4J268 109 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 B4DEV8 164 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 UBE2G1P62253 170 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 RHEBQ15382 184 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 LINC00336Q6ZUF6 198 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 ZFP30Q9Y2G7 519 aa10.64□□□□□ -0.71
CPSF1-210ENST00000532935 TRBV6-1A0A0K0K1D8 114 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 ZNF727A8MUV8 499 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 RTL8CO15255 209 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 AKR1C3P42330 323 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 COX8CQ7Z4L0 72 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 OR4C5Q8NGB2 326 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
CPSF1-210ENST00000532935 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 NBDYA0A0U1RRE5 68 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 LTAP01374 205 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 TMEM241Q24JQ0 296 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 ZNF876PQ49A33 203 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 NAT8Q9UHE5 227 aa10.62□□□□□ -0.71
CPSF1-210ENST00000532935 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
CPSF1-210ENST00000532935 PKHD1P08F94 4074 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 A0A087WWC5 75 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 SCO2A0A1W2PP80 73 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 C9JCJ5 164 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
CPSF1-210ENST00000532935 CRIP1P50238 77 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 SMIM7Q9BQ49 75 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 PARLQ9H300 379 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 Q9H8V8 135 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
CPSF1-210ENST00000532935 M0R036 132 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 SH2D1AO60880 128 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 ORM1P02763 201 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 CEBPGP53567 150 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 MRPL23Q16540 153 aaKnown RBP10.6□□□□□ -0.71
CPSF1-210ENST00000532935 FAM162BQ5T6X4 162 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 C1orf134Q5TEV5 83 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 ATRAIDQ6UW56 229 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 PTH2Q96A98 100 aa10.6□□□□□ -0.71
CPSF1-210ENST00000532935 C7orf77A4D0Y5 90 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 PRSS29PA6NIE9 313 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 RS1O15537 224 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
CPSF1-210ENST00000532935 S100A4P26447 101 aaKnown RBP10.59□□□□□ -0.71
CPSF1-210ENST00000532935 ASIPP42127 132 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 ZNF674Q2M3X9 581 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 TMEM242Q9NWH2 141 aa10.59□□□□□ -0.71
CPSF1-210ENST00000532935 K7EQD1 137 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 GYPEP15421 78 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 GATA1P15976 413 aaPredicted RBP10.58□□□□□ -0.72
CPSF1-210ENST00000532935 CFAP126Q5VTH2 177 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 NHLRC2Q8NBF2 726 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 SMCO4Q9NRQ5 59 aa10.58□□□□□ -0.72
CPSF1-210ENST00000532935 CIDEAO60543 219 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 SRIP30626 198 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 DNLZQ5SXM8 178 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 RPS10P5Q9NQ39 176 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 IL36BQ9NZH7 164 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 DNAH11Q96DT5 4516 aa10.57□□□□□ -0.72
CPSF1-210ENST00000532935 H3BVH4 76 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 SCO1O75880 301 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 LINC01559Q495D7 138 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 BAGE2Q86Y30 109 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 C6orf223Q8N319 242 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
CPSF1-210ENST00000532935 DYNC1H1Q14204 4646 aaKnown RBP10.56□□□□□ -0.72
CPSF1-210ENST00000532935 IGHV3-73A0A0B4J1V6 119 aa10.55□□□□□ -0.72
CPSF1-210ENST00000532935 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms