RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 MTURNQ8N3F0 131 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
PCDHA3-202ENST00000532566 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 DEFB130BP0DP73 79 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 DEFB130AP0DP74 79 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 SCGB1A1P11684 91 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 LMO4P61968 165 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 K7EMI3 77 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 BVES-AS1Q5T3Y7 98 aa11.85□□□□□ -0.51
PCDHA3-202ENST00000532566 IGHG2P01859 326 aa11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 SPRY2O43597 315 aa11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 NPSP0C0P6 89 aa11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 C9orf118A6NHY6 69 aa11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 ANKRD11Q6UB99 2663 aaPredicted RBP11.84□□□□□ -0.51
PCDHA3-202ENST00000532566 GAGE12JA6NER3 117 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 AZU1P20160 251 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE1Q13065 139 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE4Q13068 117 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE5Q13069 117 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 NRGNQ92686 78 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 J3QKU1 62 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 C9orf47Q6ZRZ4 202 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 A0A1B0GV72 72 aa11.83□□□□□ -0.52
PCDHA3-202ENST00000532566 SIVA1O15304 175 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 CTRLP40313 264 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 LINC01545Q5VT33 79 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 TSPAN13O95857 204 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 PRB1P04280 392 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 CRYGBP07316 175 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 NACAE9PAV3 2078 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 TANC2Q9HCD6 1990 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 CRPP02741 224 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 ABCA2Q9BZC7 2435 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 CKS1BP61024 79 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 SIGMAR1Q99720 223 aa11.82□□□□□ -0.52
PCDHA3-202ENST00000532566 CPAMD8Q8IZJ3 1885 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 YPEL4Q96NS1 127 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 K7EMT4 169 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 LINC00322Q6ZN03 302 aaPredicted RBP11.81□□□□□ -0.52
PCDHA3-202ENST00000532566 IGHV3-38A0A0C4DH36 116 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 PAX4O43316 350 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 CFHR3Q02985 330 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 TAL2Q16559 108 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 C2CD3Q4AC94 2353 aa11.8□□□□□ -0.52
PCDHA3-202ENST00000532566 EXPH5Q8NEV8 1989 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE7O76087 117 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE12FP0CL80 117 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE12GP0CL81 117 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 GAGE12IP0CL82 117 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 SLURP1P55000 103 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 RHOHQ15669 191 aa11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 RPL39LQ96EH5 51 aaKnown RBP11.79□□□□□ -0.52
PCDHA3-202ENST00000532566 ANKRD39Q53RE8 183 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 ADAMTSL5Q6ZMM2 481 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 GPHB5Q86YW7 130 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 C10orf126Q8N4M7 172 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 ZNF625Q96I27 306 aaPredicted RBP11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 TRBV25-1A0A075B6N4 114 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 UNQ9165/PRO28630Q6UXU0 137 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 CCDC140Q96MF4 163 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 MBD6Q96DN6 1003 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 HIVEP3Q5T1R4 2406 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 ARHGAP32A7KAX9 2087 aa11.78□□□□□ -0.52
PCDHA3-202ENST00000532566 J3QQQ9 107 aa11.77□□□□□ -0.52
PCDHA3-202ENST00000532566 A6NDX4 124 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 C19orf84I3L1E1 186 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 CEND1Q8N111 149 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 SPAG8Q99932 426 aaPredicted RBP11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 LINC01548A6NM66 108 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 EBI3Q14213 229 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.53
PCDHA3-202ENST00000532566 TMEM243Q9BU79 118 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 CCL24O00175 119 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 LEPROTO15243 131 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 TRBV12-3P01733 135 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 SS18Q15532 418 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 OCIAD2Q56VL3 154 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 TRAV8-4A0A0B4J246 113 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 TMEM89A2RUT3 159 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 SLC25A20O43772 301 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 PRORYQ9H606 182 aa11.76□□□□□ -0.53
PCDHA3-202ENST00000532566 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 A0A087WW49 117 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 DEFB1P60022 68 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 C11orf71Q6IPW1 123 aa11.75□□□□□ -0.53
PCDHA3-202ENST00000532566 DEFB125Q8N687 156 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms