RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 LINC00482Q8N8I6 264 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 CHCHD1Q96BP2 118 aaKnown RBP12□□□□□ -0.49
PPFIA1-222ENST00000532504 PRB2P02812 416 aaPredicted RBP12□□□□□ -0.49
PPFIA1-222ENST00000532504 CLPSL2Q6UWE3 100 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 ZNF48Q96MX3 618 aaPredicted RBP12□□□□□ -0.49
PPFIA1-222ENST00000532504 C2CD3Q4AC94 2353 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 LINC00158P58513 81 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 FAM104BQ5XKR9 115 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 FAM167A-AS1Q96KT0 104 aa12□□□□□ -0.49
PPFIA1-222ENST00000532504 IGKV1D-37A0A075B6S9 117 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 PKIAP61925 76 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 C16orf74Q96GX8 76 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 ATP5G1P05496 136 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 EIF4EBP1Q13541 118 aaPredicted RBP11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 DEFB114Q30KQ6 69 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 LENEPQ9Y5L5 61 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 CT83Q5H943 113 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 TMEM243Q9BU79 118 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 UQCR10Q9UDW1 63 aa11.99□□□□□ -0.49
PPFIA1-222ENST00000532504 RHOHQ15669 191 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 V9GYV3 84 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 I3L3M4 83 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 SLAQ13239 276 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 ANGP03950 147 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 Q8N6K4 173 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 PSMB8P28062 276 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 LAMA2P24043 3122 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-222ENST00000532504 FAM231BA6NCW3 169 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 ZNF493Q6ZR52 646 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 Q9HAA7 133 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 IGKCP01834 107 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 ANKRD17O75179 2603 aaKnown RBP11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 COLCA2A8K830 154 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 Q6ZQT7 251 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 Q8N1Y9 231 aa11.97□□□□□ -0.49
PPFIA1-222ENST00000532504 ADAMTS20P59510 1910 aa11.96□□□□□ -0.49
PPFIA1-222ENST00000532504 GYPEP15421 78 aa11.96□□□□□ -0.49
PPFIA1-222ENST00000532504 FAM231DQ6ZW35 169 aa11.96□□□□□ -0.49
PPFIA1-222ENST00000532504 TRANK1O15050 2925 aa11.96□□□□□ -0.49
PPFIA1-222ENST00000532504 ZNF124Q15973 351 aa11.96□□□□□ -0.49
PPFIA1-222ENST00000532504 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.5
PPFIA1-222ENST00000532504 POLR3KQ9Y2Y1 108 aaPredicted RBP11.96□□□□□ -0.5
PPFIA1-222ENST00000532504 A0A0J9YX75 114 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 K7EN84 100 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 FAM110AQ9BQ89 295 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 TRBV7-9A0A0J9YWB2 115 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 NPC2P61916 151 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 KLF5Q13887 457 aaPredicted RBP11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 RNF151Q2KHN1 245 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 OXLD1Q5BKU9 147 aa11.95□□□□□ -0.5
PPFIA1-222ENST00000532504 APOMO95445 188 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 TNRC6BQ9UPQ9 1833 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 F8W735 103 aaPredicted RBP11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 LGALS9O00182 355 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 F8P00451 2351 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 TANC2Q9HCD6 1990 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 ZNF815PA8K554 130 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 SEC11AP67812 179 aa11.94□□□□□ -0.5
PPFIA1-222ENST00000532504 IGLC2P0DOY2 106 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 J3QR89 54 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 ZNF561-AS1K7EIQ3 104 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 TYMSP04818 313 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 RNF152Q8N8N0 203 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 MRPS16Q9Y3D3 137 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 IGLL5B9A064 214 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 CCL18P55774 89 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 RNASE13Q5GAN3 156 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
PPFIA1-222ENST00000532504 A8MWP6 167 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 ERASQ7Z444 233 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 RAI1Q7Z5J4 1906 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 IGKV2D-24A0A075B6R9 120 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 TEX48A0A1B0GUV7 120 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 C9orf47Q6ZRZ4 202 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 RASL10AQ92737 203 aa11.92□□□□□ -0.5
PPFIA1-222ENST00000532504 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 H3BMM0 161 aa11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 NPYP01303 97 aa11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 UBE2WQ96B02 151 aa11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
PPFIA1-222ENST00000532504 SMIM27A0A1W2PRY6 76 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 MRPL23Q16540 153 aaKnown RBP11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 MSRB1Q9NZV6 116 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 UNC80Q8N2C7 3258 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 EXPH5Q8NEV8 1989 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 EREGO14944 169 aa11.9□□□□□ -0.5
PPFIA1-222ENST00000532504 K7EQG2 157 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms