RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 FAM159AQ6UWV7 190 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 EIF4E3Q8N5X7 224 aaKnown RBP13.16□□□□□ -0.3
UBXN1-212ENST00000531625 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
UBXN1-212ENST00000531625 GNG4P50150 75 aa13.15□□□□□ -0.3
UBXN1-212ENST00000531625 ESRGQ1W209 222 aa13.15□□□□□ -0.3
UBXN1-212ENST00000531625 ZNF674Q2M3X9 581 aa13.15□□□□□ -0.3
UBXN1-212ENST00000531625 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
UBXN1-212ENST00000531625 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
UBXN1-212ENST00000531625 COX8CQ7Z4L0 72 aa13.14□□□□□ -0.31
UBXN1-212ENST00000531625 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
UBXN1-212ENST00000531625 VPS13BQ7Z7G8 4022 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 SH2D1AO60880 128 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 SRP19P09132 144 aaKnown RBP13.13□□□□□ -0.31
UBXN1-212ENST00000531625 HOXA5P20719 270 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 PEA15Q15121 130 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 ANXA2RQ3ZCQ2 193 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 MLST8Q9BVC4 326 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 PARLQ9H300 379 aa13.13□□□□□ -0.31
UBXN1-212ENST00000531625 A0A0J9YY99 117 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 EPM2AB3EWF7 344 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 NDUFS6O75380 124 aaKnown RBP13.12□□□□□ -0.31
UBXN1-212ENST00000531625 MGST1P10620 155 aaKnown RBP13.12□□□□□ -0.31
UBXN1-212ENST00000531625 CRIP1P50238 77 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 PRR27Q6MZM9 219 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
UBXN1-212ENST00000531625 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
UBXN1-212ENST00000531625 SNURFLB1AK76 121 aa13.11□□□□□ -0.31
UBXN1-212ENST00000531625 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
UBXN1-212ENST00000531625 TDRG1Q3Y452 100 aa13.11□□□□□ -0.31
UBXN1-212ENST00000531625 KCNS1Q96KK3 526 aa13.11□□□□□ -0.31
UBXN1-212ENST00000531625 GSN-AS1Q9NRJ2 163 aa13.11□□□□□ -0.31
UBXN1-212ENST00000531625 TRBV20OR9-2A0A075B6H5 130 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 GAGE12BA1L429 117 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 PGPEP1LA6NFU8 196 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 C9JQL5 133 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 GAGE7O76087 117 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 ORM1P02763 201 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 GAGE12FP0CL80 117 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 GAGE12GP0CL81 117 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 GAGE12IP0CL82 117 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
UBXN1-212ENST00000531625 C9JCJ5 164 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 M0R036 132 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 GNRH2O43555 120 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 IGLV2-8P01709 118 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 TYMSP04818 313 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 LINC00315P59091 139 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 Q6ZRN7 208 aaPredicted RBP13.09□□□□□ -0.31
UBXN1-212ENST00000531625 C11orf72Q8NBR9 251 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 SMIM12Q96EX1 92 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 SMIM7Q9BQ49 75 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 SMDT1Q9H4I9 107 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 MYCBP2O75592 4640 aa13.09□□□□□ -0.31
UBXN1-212ENST00000531625 TCL1AP56279 114 aa13.08□□□□□ -0.32
UBXN1-212ENST00000531625 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
UBXN1-212ENST00000531625 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
UBXN1-212ENST00000531625 IGKV3D-20A0A0C4DH25 116 aa13.07□□□□□ -0.32
UBXN1-212ENST00000531625 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
UBXN1-212ENST00000531625 B4DEV8 164 aa13.07□□□□□ -0.32
UBXN1-212ENST00000531625 DAZ2Q13117 558 aaKnown RBP13.07□□□□□ -0.32
UBXN1-212ENST00000531625 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 A0A096LPF7 62 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 INAFM2P0DMQ5 153 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 DAZAP1Q96EP5 407 aaKnown RBP13.06□□□□□ -0.32
UBXN1-212ENST00000531625 VSIG2Q96IQ7 327 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 BIN3Q9NQY0 253 aa13.06□□□□□ -0.32
UBXN1-212ENST00000531625 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-212ENST00000531625 KRBOX1C9JBD0 128 aa13.05□□□□□ -0.32
UBXN1-212ENST00000531625 LINC01559Q495D7 138 aa13.05□□□□□ -0.32
UBXN1-212ENST00000531625 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
UBXN1-212ENST00000531625 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
UBXN1-212ENST00000531625 C18orf15Q96N68 181 aa13.05□□□□□ -0.32
UBXN1-212ENST00000531625 TRGV1A0A0A0MS02 117 aa13.04□□□□□ -0.32
UBXN1-212ENST00000531625 S100A4P26447 101 aaKnown RBP13.04□□□□□ -0.32
UBXN1-212ENST00000531625 ASIPP42127 132 aa13.04□□□□□ -0.32
UBXN1-212ENST00000531625 XGP55808 180 aa13.04□□□□□ -0.32
UBXN1-212ENST00000531625 Q6ZTI0 123 aa13.04□□□□□ -0.32
UBXN1-212ENST00000531625 SRRM2Q9UQ35 2752 aaKnown RBP13.04□□□□□ -0.32
UBXN1-212ENST00000531625 GRIFINA4D1Z8 144 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 K7EN84 100 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 EREGO14944 169 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 SIVA1O15304 175 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 RPL19P84098 196 aaKnown RBP13.03□□□□□ -0.32
UBXN1-212ENST00000531625 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 SPXQ9BT56 116 aa13.03□□□□□ -0.32
UBXN1-212ENST00000531625 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
UBXN1-212ENST00000531625 SPINK4O60575 86 aa13.02□□□□□ -0.33
UBXN1-212ENST00000531625 ERVFC1-1P60608 527 aa13.02□□□□□ -0.33
UBXN1-212ENST00000531625 LY96Q9Y6Y9 160 aa13.02□□□□□ -0.33
UBXN1-212ENST00000531625 C19orf71A6NCJ1 209 aa13.01□□□□□ -0.33
UBXN1-212ENST00000531625 H3BVH4 76 aa13.01□□□□□ -0.33
UBXN1-212ENST00000531625 P01737 135 aa13.01□□□□□ -0.33
UBXN1-212ENST00000531625 SFTA3P0C7M3 94 aa13.01□□□□□ -0.33
UBXN1-212ENST00000531625 TMEM241Q24JQ0 296 aa13.01□□□□□ -0.33
UBXN1-212ENST00000531625 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms