RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 SLC25A5P05141 298 aaKnown RBP-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 AKR1D1P51857 326 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 ESPL1Q14674 2120 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 FAM74A4Q5TZK3 123 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 OR2T2Q6IF00 324 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 SLC48A1Q6P1K1 146 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 C3orf33Q6P1S2 294 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 SLC25A26Q70HW3 274 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 Q8IZM0 81 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 PPDPFLQ8WWR9 84 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 IFI27L1Q96BM0 104 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 Q96NJ1 140 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 STOML2Q9UJZ1 356 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 V9GYV3 84 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 HERC2O95714 4834 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 KIAA1549LQ6ZVL6 1849 aa-0.54□□□□□ -2.5
RC3H1-206ENST00000531594 FAT1Q14517 4588 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 TNS1Q9HBL0 1735 aaKnown RBP-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 PIK3C2AO00443 1686 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 USP54Q70EL1 1684 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 ALMS1Q8TCU4 4167 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 LOC107984640A0A0U1RRK4 108 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 TMEM14DPA8MWL7 114 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 SLC25A6P12236 298 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 SERPINB1P30740 379 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 SPRR1AP35321 89 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 SSBP1Q04837 148 aaKnown RBP-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 INSL4Q14641 139 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 OR8B8Q15620 311 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 STX12Q86Y82 276 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 C20orf197Q8N268 126 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 COX7B2Q8TF08 81 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 SSC5DA1L4H1 1573 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 DCHS2Q6V1P9 2916 aa-0.55□□□□□ -2.5
RC3H1-206ENST00000531594 PTPN13Q12923 2485 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 FAT2Q9NYQ8 4349 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 TRAV22A0A0B4J277 110 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 TRBV7-6A0A0J9YX20 115 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 PNMA8CA0A1B0GUJ8 204 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 UQCRQO14949 82 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 PFDN1O60925 122 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 TCRAP04437 139 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 SPINK8P0C7L1 97 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 CCL3L1P16619 93 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 RPL22P35268 128 aaKnown RBP-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 Q5VSD8 79 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 CHMP6Q96FZ7 201 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 HOPXQ9BPY8 73 aaPredicted RBP-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 CNFNQ9BYD5 112 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 BATF3Q9NR55 127 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 GID8Q9NWU2 228 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 TAS2R8Q9NYW2 309 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 MED31Q9Y3C7 131 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 LRP1BQ9NZR2 4599 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 UBR2Q8IWV8 1755 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 TCOF1Q13428 1488 aaKnown RBP-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 LRP5O75197 1615 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 NHSL1Q5SYE7 1610 aa-0.56□□□□□ -2.5
RC3H1-206ENST00000531594 ABCA1O95477 2261 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 DLEC1Q9Y238 1755 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 A0A1B0GW64 132 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 A0A1W2PRE2 83 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 DEGS1O15121 323 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 HIST1H1BP16401 226 aaKnown RBP-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 RPL7P18124 248 aaKnown RBP-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 NPC2P61916 151 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 PSPHP78330 225 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 PLGLB1Q02325 96 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 SNX29P2Q8IUI4 249 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 NDUFAF1Q9Y375 327 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 ZNF292O60281 2723 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 LAMA5O15230 3695 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 PTPRGP23470 1445 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 RYR3Q15413 4870 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 MYO7AQ13402 2215 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 BSNQ9UPA5 3926 aa-0.57□□□□□ -2.5
RC3H1-206ENST00000531594 SETXQ7Z333 2677 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 CADP27708 2225 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 A2MP01023 1474 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 VIRMAQ69YN4 1812 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 PGRMC1O00264 195 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 FAM107AO95990 144 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 POLR2HP52434 150 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 HSD17B12Q53GQ0 312 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 TRIQKQ629K1 86 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 DYNLRB2Q8TF09 96 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 SLC35B3Q9H1N7 401 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 CALML5Q9NZT1 146 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 METTL1Q9UBP6 276 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 SCP2D1Q9UJQ7 156 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 TANC2Q9HCD6 1990 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 PTPRQQ9UMZ3 2332 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 YTHDC2Q9H6S0 1430 aaKnown RBP-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 TENM2Q9NT68 2774 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 RYR1P21817 5038 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 NCOR1O75376 2440 aa-0.58□□□□□ -2.5
RC3H1-206ENST00000531594 TRBV10-3A0A0K0K1G6 114 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 LOC730098B7Z3J9 87 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 E7EQ34 232 aa-0.59□□□□□ -2.5
RC3H1-206ENST00000531594 G3V318 75 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms