RNA–Protein interactions for RNA: ENST00000531550.1

SCN4B-205, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 1,206 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-205ENST00000531550 FAM231DQ6ZW35 169 aa12.62□□□□□ -0.39
SCN4B-205ENST00000531550 C7orf71A4D174 169 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 M0R036 132 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 M0R2Z0 102 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 CRXO43186 299 aaPredicted RBP12.61□□□□□ -0.39
SCN4B-205ENST00000531550 SNAPINO95295 136 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 PFN1P07737 140 aaKnown RBP12.61□□□□□ -0.39
SCN4B-205ENST00000531550 CLRN3Q8NCR9 226 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 OSTCQ9NRP0 149 aa12.61□□□□□ -0.39
SCN4B-205ENST00000531550 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 NUDT3O95989 172 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 RNASE4P34096 147 aaKnown RBP12.6□□□□□ -0.39
SCN4B-205ENST00000531550 KIR3DS1Q14943 382 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 GFI1BQ5VTD9 330 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 PRR27Q6MZM9 219 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 DAZAP1Q96EP5 407 aaKnown RBP12.6□□□□□ -0.39
SCN4B-205ENST00000531550 SFRP2Q96HF1 295 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 TMEM208Q9BTX3 173 aa12.6□□□□□ -0.39
SCN4B-205ENST00000531550 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 J3KRW8 73 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 SH2D1AO60880 128 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 ZNF324O75467 553 aaPredicted RBP12.59□□□□□ -0.39
SCN4B-205ENST00000531550 BTN1A1Q13410 526 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 RHEBQ15382 184 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 IBA57Q5T440 356 aaKnown RBP12.59□□□□□ -0.39
SCN4B-205ENST00000531550 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 LINC00588Q9Y4M8 146 aa12.59□□□□□ -0.39
SCN4B-205ENST00000531550 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 MT-ND4LP03901 98 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 CCL18P55774 89 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 ERVFC1-1P60608 527 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 C15orf54Q8N8G6 183 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 OR10G8Q8NGN5 311 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 ANAPC16Q96DE5 110 aa12.58□□□□□ -0.4
SCN4B-205ENST00000531550 RNASE7Q9H1E1 156 aaKnown RBP12.58□□□□□ -0.4
SCN4B-205ENST00000531550 TRAV12-3A0A0B4J271 114 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 C7orf77A4D0Y5 90 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 ZNF705GA8MUZ8 300 aaPredicted RBP12.57□□□□□ -0.4
SCN4B-205ENST00000531550 F5H768 121 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 P01737 135 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 PRM2P04554 102 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 CTDSP1Q9GZU7 261 aa12.57□□□□□ -0.4
SCN4B-205ENST00000531550 A0A087WWC5 75 aa12.56□□□□□ -0.4
SCN4B-205ENST00000531550 GATCO43716 136 aaKnown RBP12.56□□□□□ -0.4
SCN4B-205ENST00000531550 INSP01308 110 aa12.56□□□□□ -0.4
SCN4B-205ENST00000531550 KRTAP10-2P60368 255 aa12.56□□□□□ -0.4
SCN4B-205ENST00000531550 LINC01559Q495D7 138 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 CT83Q5H943 113 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 Q6ZQT7 251 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 TMEM256Q8N2U0 113 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 TMEM242Q9NWH2 141 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 C11orf21Q9P2W6 132 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 V9GYV3 84 aa12.55□□□□□ -0.4
SCN4B-205ENST00000531550 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
SCN4B-205ENST00000531550 ORM1P02763 201 aa12.54□□□□□ -0.4
SCN4B-205ENST00000531550 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
SCN4B-205ENST00000531550 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
SCN4B-205ENST00000531550 KRTAP1-5Q9BYS1 174 aa12.54□□□□□ -0.4
SCN4B-205ENST00000531550 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
SCN4B-205ENST00000531550 IGKV3D-20A0A0C4DH25 116 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 H7BYZ3 331 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 ATP5G1P05496 136 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 CXCL1P09341 107 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 RPS20P60866 119 aaKnown RBP12.53□□□□□ -0.4
SCN4B-205ENST00000531550 ATRAIDQ6UW56 229 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 OR2D3Q8NGH3 330 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 PYGO2Q9BRQ0 406 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 Q9H8V8 135 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 RPS10P5Q9NQ39 176 aa12.53□□□□□ -0.4
SCN4B-205ENST00000531550 IGHV1OR15-1A0A075B7D0 117 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 A8MWL6 223 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 EPM2AB3EWF7 344 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 ANXA2RQ3ZCQ2 193 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 TTC32Q5I0X7 151 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.41
SCN4B-205ENST00000531550 XKRY2A2RUG3 117 aa12.51□□□□□ -0.41
SCN4B-205ENST00000531550 AZU1P20160 251 aa12.51□□□□□ -0.41
SCN4B-205ENST00000531550 BTF3P20290 206 aaKnown RBP12.51□□□□□ -0.41
SCN4B-205ENST00000531550 DNLZQ5SXM8 178 aa12.51□□□□□ -0.41
SCN4B-205ENST00000531550 LINC01587Q99440 93 aa12.51□□□□□ -0.41
SCN4B-205ENST00000531550 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 CBY3A6NI87 242 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 RPL19P84098 196 aaKnown RBP12.5□□□□□ -0.41
SCN4B-205ENST00000531550 MUC21Q5SSG8 566 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 TSKUQ8WUA8 353 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 IMMP2LQ96T52 175 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 GFRA4Q9GZZ7 299 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 IL36BQ9NZH7 164 aa12.5□□□□□ -0.41
SCN4B-205ENST00000531550 FOXA3P55318 350 aaPredicted RBP12.49□□□□□ -0.41
SCN4B-205ENST00000531550 NAGKQ9UJ70 344 aa12.49□□□□□ -0.41
SCN4B-205ENST00000531550 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
SCN4B-205ENST00000531550 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
SCN4B-205ENST00000531550 INAFM2P0DMQ5 153 aa12.48□□□□□ -0.41
SCN4B-205ENST00000531550 VPS13BQ7Z7G8 4022 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms