RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 TRBV6-4A0A1B0GX49 114 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 PGPEP1LA6NFU8 196 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 HMSDA8MTL9 139 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 UMAD1C9J7I0 102 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 K7EP13 123 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 SEC11BP0C7V7 166 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 EVI2AP22794 236 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 CST9LP1Q5W188 147 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 Q6ZRN7 208 aaPredicted RBP9.07□□□□□ -0.96
VPS28-211ENST00000530790 NFE4Q86UQ8 179 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 FAM213BQ8TBF2 198 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 ZC2HC1AQ96GY0 325 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 ZNF471Q9BX82 626 aaPredicted RBP9.07□□□□□ -0.96
VPS28-211ENST00000530790 ZFP30Q9Y2G7 519 aa9.07□□□□□ -0.96
VPS28-211ENST00000530790 IGKV3D-20A0A0C4DH25 116 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 B4DEV8 164 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 MGST1P10620 155 aaKnown RBP9.06□□□□□ -0.96
VPS28-211ENST00000530790 AKR1C3P42330 323 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 TIRAPP58753 221 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
VPS28-211ENST00000530790 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 A8MWV9 139 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 H3BVH4 76 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 M0R036 132 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 SH2D1AO60880 128 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 PFDN1O60925 122 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 ERVFC1-1P60608 527 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 EIF5AP63241 154 aaKnown RBP9.05□□□□□ -0.96
VPS28-211ENST00000530790 LGALSLQ3ZCW2 172 aaPredicted RBP9.05□□□□□ -0.96
VPS28-211ENST00000530790 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 FAM162BQ5T6X4 162 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 C10orf126Q8N4M7 172 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 IL36BQ9NZH7 164 aa9.05□□□□□ -0.96
VPS28-211ENST00000530790 TRBV6-1A0A0K0K1D8 114 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 A0A1B0GV50 99 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 EREGO14944 169 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 PAGE4O60829 102 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 CDK2AP2O75956 126 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 LTAP01374 205 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 CRYGDP07320 174 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 ZFP2Q6ZN57 461 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 SYT8Q8NBV8 401 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 PARLQ9H300 379 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 MSRB1Q9NZV6 116 aa9.04□□□□□ -0.96
VPS28-211ENST00000530790 TRAV8-6A0A0B4J262 113 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 KRBOX1C9JBD0 128 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 TPT1P13693 172 aaKnown RBP9.03□□□□□ -0.96
VPS28-211ENST00000530790 CRIP1P50238 77 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 MBD3L1Q8WWY6 194 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 TNFRSF18Q9Y5U5 241 aa9.03□□□□□ -0.96
VPS28-211ENST00000530790 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 GRIFINA4D1Z8 144 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 RHODO00212 210 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 H2AFB1P0C5Y9 115 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 ZNF674Q2M3X9 581 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 KRTAP17-1Q9BYP8 105 aa9.02□□□□□ -0.97
VPS28-211ENST00000530790 TMSB15BA0A087X1C1 80 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 SCO2A0A1W2PP80 73 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 S100A9P06702 114 aaKnown RBP9.01□□□□□ -0.97
VPS28-211ENST00000530790 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 LINC01559Q495D7 138 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 LINC01556Q5JQF7 62 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 LELP1Q5T871 98 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 TMUB2Q71RG4 321 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 ATP6V0E2Q8NHE4 81 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 GTSF1LQ9H1H1 148 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 PHLDA3Q9Y5J5 127 aa9.01□□□□□ -0.97
VPS28-211ENST00000530790 GAGE12JA6NER3 117 aa9□□□□□ -0.97
VPS28-211ENST00000530790 GAGE1Q13065 139 aa9□□□□□ -0.97
VPS28-211ENST00000530790 GAGE4Q13068 117 aa9□□□□□ -0.97
VPS28-211ENST00000530790 GAGE5Q13069 117 aa9□□□□□ -0.97
VPS28-211ENST00000530790 GAGE13Q4V321 117 aa9□□□□□ -0.97
VPS28-211ENST00000530790 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
VPS28-211ENST00000530790 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
VPS28-211ENST00000530790 JPT2Q9H910 190 aa9□□□□□ -0.97
VPS28-211ENST00000530790 RYR1P21817 5038 aa9□□□□□ -0.97
VPS28-211ENST00000530790 M0R381 172 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 Q6ZSN1 163 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 ZFP82Q8N141 532 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 SAMD10Q9BYL1 202 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 MANBALQ9NQG1 85 aa8.99□□□□□ -0.97
VPS28-211ENST00000530790 A0A087WTM6 91 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 EIF5AL1Q6IS14 154 aaKnown RBP8.98□□□□□ -0.97
VPS28-211ENST00000530790 BAGE2Q86Y30 109 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 MAPKAPK5-AS1Q8N8E1 139 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 PGPEP1Q9NXJ5 209 aa8.98□□□□□ -0.97
VPS28-211ENST00000530790 A0A087WWL8 130 aa8.97□□□□□ -0.97
VPS28-211ENST00000530790 PSCAO43653 123 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms