RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 SLC25A21Q9BQT8 299 aaPredicted RBP2.37□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM70Q9BUB7 260 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 ARL6Q9H0F7 186 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 C20orf85Q9H1P6 137 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 MSRB1Q9NZV6 116 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 SHPKQ9UHJ6 478 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 C14orf166Q9Y224 244 aaKnown RBP2.37□□□□□ -2.03
PTPRC-213ENST00000529828 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 CRYM-AS1A6NIL9 109 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 H3BNG1 76 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 H3BP45 60 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 H3BRN7 92 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 PSCAO43653 123 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 OR7C2O60412 319 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 PLA2G1BP04054 148 aaKnown RBP2.37□□□□□ -2.03
PTPRC-213ENST00000529828 AKR1C1Q04828 323 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 PEA15Q15121 130 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 FA2HQ7L5A8 372 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 LYZL2Q7Z4W2 148 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 THAP8Q8NA92 274 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 THAP6Q8TBB0 222 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 DEFB104AQ8WTQ1 72 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 BTF3L4Q96K17 158 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 LINC00467Q9BRT7 94 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 ACTR3CQ9C0K3 210 aaPredicted RBP2.37□□□□□ -2.03
PTPRC-213ENST00000529828 PSG8Q9UQ74 426 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 LY96Q9Y6Y9 160 aa2.37□□□□□ -2.03
PTPRC-213ENST00000529828 A0A087WWL8 130 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 GCGP01275 180 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 OR5G3P0C626 314 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SMIM17P0DL12 118 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 INPP1P49441 399 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 NCS1P62166 190 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 ID3Q02535 119 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF415Q09FC8 603 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 RHEBQ15382 184 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 LINC01620Q4KN68 170 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 LYPD5Q6UWN5 251 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM229BQ8NBD8 167 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 PCNPQ8WW12 178 aaKnown RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 HIST1H2BAQ96A08 127 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 C8orf49Q96NF6 230 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SHANK2-AS3Q9BTD1 123 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 Q9HAA7 133 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 MRPL16Q9NX20 251 aaKnown RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SS18L2Q9UHA2 77 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 HIGD1AQ9Y241 93 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 TRAV9-2A0A087WT02 112 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 DUXBA0A1W2PPF3 345 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 LRCOL1A6NCL2 159 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 PMS2P5A8MQ11 134 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 E5RGE8 158 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 LECT2O14960 151 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 CRYGDP07320 174 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 RPL7P18124 248 aaKnown RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 EVI2AP22794 236 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SULT1A1P50225 295 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SULT1A2P50226 295 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 TAS2R19P59542 299 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 CYCSP99999 105 aaKnown RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 WFDC2Q14508 124 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 JOSD1Q15040 202 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 GGNBP1Q5YKI7 109 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 Q8N814 137 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 OR13C6PQ8NH95 151 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF431Q8TF32 576 aaPredicted RBP2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SMIM4Q8WVI0 70 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 GPR82Q96P67 336 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SMCO4Q9NRQ5 59 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 MTFP1Q9UDX5 166 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 SLC45A2Q9UMX9 530 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 KLF12Q9Y4X4 402 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 LPAP08519 4548 aa2.36□□□□□ -2.03
PTPRC-213ENST00000529828 A0A087X0K7 114 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PRSS46E5RG02 174 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PHOX2AO14813 284 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 ZNF324O75467 553 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 SFTA3P0C7M3 94 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 LINC00869P0C866 280 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 CT45A10P0DMU9 189 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 VPREB1P12018 145 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TNFSF8P32971 234 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 SRPXP78539 464 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 DAZ2Q13117 558 aaKnown RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TMEM97Q5BJF2 176 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 C10orf91Q5T1B1 145 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 Q6ZQT7 251 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 CYP2G1PQ6ZSU1 146 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TMUB2Q71RG4 321 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 C11orf72Q8NBR9 251 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 DIRAS2Q96HU8 199 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 MARVELD1Q9BSK0 173 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PSMG3Q9BT73 122 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 CTDSP1Q9GZU7 261 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 PRO1933Q9H354 126 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 LYRM2Q9NU23 88 aaPredicted RBP2.35□□□□□ -2.03
PTPRC-213ENST00000529828 HSPB8Q9UJY1 196 aa2.35□□□□□ -2.03
PTPRC-213ENST00000529828 TP53TG3Q9ULZ0 132 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms