RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 ZNF506Q5JVG8 444 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 Q6ZR54 194 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 OR4C5Q8NGB2 326 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 IL36BQ9NZH7 164 aa11.16□□□□□ -0.62
TSPAN4-218ENST00000529566 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 M0R036 132 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 RS1O15537 224 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 PDE6DO43924 150 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 IFNA1P01562 189 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 IGLV2-8P01709 118 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 ASIPP42127 132 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 CCL18P55774 89 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 VAX2Q9UIW0 290 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 DNAH17Q9UFH2 4485 aa11.15□□□□□ -0.62
TSPAN4-218ENST00000529566 FAT2Q9NYQ8 4349 aa11.14□□□□□ -0.63
TSPAN4-218ENST00000529566 GRIFINA4D1Z8 144 aa11.14□□□□□ -0.63
TSPAN4-218ENST00000529566 PIK3CD-AS1Q5SR53 167 aa11.14□□□□□ -0.63
TSPAN4-218ENST00000529566 SCRT2Q9NQ03 307 aa11.14□□□□□ -0.63
TSPAN4-218ENST00000529566 IGLV2-18A0A075B6J9 118 aa11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 RAB19A4D1S5 217 aa11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 H3BVH4 76 aa11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 M0R2N4 97 aa11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 GATA1P15976 413 aaPredicted RBP11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 TAGLN2P37802 199 aaKnown RBP11.13□□□□□ -0.63
TSPAN4-218ENST00000529566 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
TSPAN4-218ENST00000529566 TMSB15BA0A087X1C1 80 aa11.12□□□□□ -0.63
TSPAN4-218ENST00000529566 CENPWQ5EE01 88 aa11.12□□□□□ -0.63
TSPAN4-218ENST00000529566 DMRTA1Q5VZB9 504 aa11.12□□□□□ -0.63
TSPAN4-218ENST00000529566 ICOSQ9Y6W8 199 aa11.12□□□□□ -0.63
TSPAN4-218ENST00000529566 K7EQD1 137 aa11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 CIDEAO60543 219 aa11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 MED9Q9NWA0 146 aa11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
TSPAN4-218ENST00000529566 RBFOX3A6NFN3 312 aa11.1□□□□□ -0.63
TSPAN4-218ENST00000529566 GYPEP15421 78 aa11.1□□□□□ -0.63
TSPAN4-218ENST00000529566 JPT2Q9H910 190 aa11.1□□□□□ -0.63
TSPAN4-218ENST00000529566 BIRC6Q9NR09 4857 aa11.1□□□□□ -0.63
TSPAN4-218ENST00000529566 IGHV3-73A0A0B4J1V6 119 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 CXCL1P09341 107 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 GNG4P50150 75 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 PRR27Q6MZM9 219 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 LYPD5Q6UWN5 251 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 ZFP2Q6ZN57 461 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 Q6ZSN1 163 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 SMIM12Q96EX1 92 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 PARLQ9H300 379 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 Q9H8V8 135 aa11.09□□□□□ -0.63
TSPAN4-218ENST00000529566 NBDYA0A0U1RRE5 68 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 C19orf71A6NCJ1 209 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 A8MWV9 139 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 RTL8CO15255 209 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 MED14OSP0DP75 135 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 SSBP4Q9BWG4 385 aaPredicted RBP11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 HECTD4Q9Y4D8 3996 aa11.08□□□□□ -0.64
TSPAN4-218ENST00000529566 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
TSPAN4-218ENST00000529566 PHLDA3Q9Y5J5 127 aa11.07□□□□□ -0.64
TSPAN4-218ENST00000529566 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 SNAI2O43623 268 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 NXPH4O95158 308 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 MGST1P10620 155 aaKnown RBP11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 SRIP30626 198 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 TEX261Q6UWH6 196 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 SYT8Q8NBV8 401 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
TSPAN4-218ENST00000529566 CRYGDP07320 174 aa11.05□□□□□ -0.64
TSPAN4-218ENST00000529566 ZFP82Q8N141 532 aa11.05□□□□□ -0.64
TSPAN4-218ENST00000529566 PCNPQ8WW12 178 aaKnown RBP11.05□□□□□ -0.64
TSPAN4-218ENST00000529566 K7EN84 100 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 M0R381 172 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 OR5AL1P0C617 328 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 RHOHQ15669 191 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 TOR2AQ5JU69 321 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 OR10AG1Q8NH19 301 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 FAM210AQ96ND0 272 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 Q9UF83 564 aa11.04□□□□□ -0.64
TSPAN4-218ENST00000529566 IGLC6P0CF74 106 aa11.03□□□□□ -0.64
TSPAN4-218ENST00000529566 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
TSPAN4-218ENST00000529566 DAZAP1Q96EP5 407 aaKnown RBP11.03□□□□□ -0.64
TSPAN4-218ENST00000529566 PRADC1Q9BSG0 188 aa11.03□□□□□ -0.64
TSPAN4-218ENST00000529566 A0A087WWL8 130 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 LINC00694P0DN24 101 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 GZMBP10144 247 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 TIRAPP58753 221 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 C1orf134Q5TEV5 83 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms