RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TRIQKQ629K1 86 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 PHYHIPLQ96FC7 376 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 FAM167A-AS1Q96KT0 104 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 NPCDR1Q9BY65 106 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
VPS11-203ENST00000529545 CCSO14618 274 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 OR7C2O60412 319 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 IGLV2-11P01706 119 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 S100A10P60903 97 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 SPANXN2Q5MJ10 180 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 DAZ4Q86SG3 579 aaKnown RBP5.89□□□□□ -1.47
VPS11-203ENST00000529545 TMEM252Q8N6L7 170 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 TMED6Q8WW62 240 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 ASB13Q8WXK3 278 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 FXYD5Q96DB9 178 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 DAZ3Q9NR90 486 aaKnown RBP5.89□□□□□ -1.47
VPS11-203ENST00000529545 KCNIP2Q9NS61 270 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 LYRM2Q9NU23 88 aaPredicted RBP5.89□□□□□ -1.47
VPS11-203ENST00000529545 URGCP-MRPS24S4R325 110 aa5.89□□□□□ -1.47
VPS11-203ENST00000529545 IGKV2D-24A0A075B6R9 120 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 A0A087WWC5 75 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 IGHV3-73A0A0B4J1V6 119 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 RNF222A6NCQ9 220 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 DIRC3C9JPN6 131 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 TYMSP04818 313 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 MGST1P10620 155 aaKnown RBP5.88□□□□□ -1.47
VPS11-203ENST00000529545 IL7P13232 177 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 FAM74A1Q5RGS3 127 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 CFAP126Q5VTH2 177 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 CMTM2Q8TAZ6 248 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 C2orf50Q96LR7 162 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 HYLS1Q96M11 299 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 NMES1Q9C002 83 aa5.88□□□□□ -1.47
VPS11-203ENST00000529545 IGSF23A1L1A6 192 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 UBE2L3P68036 154 aaKnown RBP5.87□□□□□ -1.47
VPS11-203ENST00000529545 C14orf177Q52M58 125 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 MARVELD1Q9BSK0 173 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 C11orf1Q9H5F2 150 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 TREM1Q9NP99 234 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 RPH3ALQ9UNE2 315 aa5.87□□□□□ -1.47
VPS11-203ENST00000529545 LOC105371267A0A1B0GV96 52 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 LINC00862A6NCI5 91 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 GAGE12JA6NER3 117 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 C17orf112F2Z3M2 114 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 F6UZH7 168 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 TAS2R45P59539 299 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 GAGE1Q13065 139 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 GAGE4Q13068 117 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 GAGE5Q13069 117 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 ELOBQ15370 118 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 ZFP69Q49AA0 526 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 GAGE13Q4V321 117 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 KCNIP4Q6PIL6 250 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 THAP6Q8TBB0 222 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 NDFIP1Q9BT67 221 aa5.86□□□□□ -1.47
VPS11-203ENST00000529545 PGPA6NDG6 321 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 FGF8P55075 233 aaPredicted RBP5.85□□□□□ -1.47
VPS11-203ENST00000529545 RAB32Q13637 225 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 KHDC3LQ587J8 217 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 FFAR4Q5NUL3 377 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 DPPA3Q6W0C5 159 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 CYB561D1Q8N8Q1 229 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 OR10G9Q8NGN4 311 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 OR5C1Q8NGR4 320 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 UBE2WQ96B02 151 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 DAZAP1Q96EP5 407 aaKnown RBP5.85□□□□□ -1.47
VPS11-203ENST00000529545 OTORQ9NRC9 128 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 KLK12Q9UKR0 248 aa5.85□□□□□ -1.47
VPS11-203ENST00000529545 A0A087WX48 190 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 TAAR5O14804 337 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 Q0VG73 95 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 SMUG1Q53HV7 270 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 ZNF506Q5JVG8 444 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 Q6ZRU5 148 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 ARL6IP6Q8N6S5 226 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 PTH2Q96A98 100 aa5.84□□□□□ -1.47
VPS11-203ENST00000529545 PGPEP1LA6NFU8 196 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 A8MWV9 139 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 BTCP35070 178 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 HNRNPA3P51991 378 aaKnown RBP5.83□□□□□ -1.48
VPS11-203ENST00000529545 NHLH2Q02577 135 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 LGALSLQ3ZCW2 172 aaPredicted RBP5.83□□□□□ -1.48
VPS11-203ENST00000529545 NIT1Q86X76 327 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 OR2T35Q8NGX2 323 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 C9orf85Q96MD7 179 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 C1orf43Q9BWL3 253 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 WDR61Q9GZS3 305 aaKnown RBP5.83□□□□□ -1.48
VPS11-203ENST00000529545 DPH3P1Q9H4G8 78 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 MBD2Q9UBB5 411 aa5.83□□□□□ -1.48
VPS11-203ENST00000529545 TRAV6A0A075B6T7 132 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 A0A0D9SG52 128 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 HSD17B11Q8NBQ5 300 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 TVP23CQ96ET8 276 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 SEC22CQ9BRL7 303 aa5.82□□□□□ -1.48
VPS11-203ENST00000529545 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms