RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 TRGV2A0A075B6R0 118 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 NUPR2A6NF83 97 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 SFTA3P0C7M3 94 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 ARMS2P0C7Q2 107 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 TMEM241Q24JQ0 296 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 OR2D3Q8NGH3 330 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 IL36BQ9NZH7 164 aa9.9□□□□□ -0.82
USF1-209ENST00000529476 HERC2O95714 4834 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 ATP5G1P05496 136 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 CXCL1P09341 107 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 GZMBP10144 247 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 COMMD7Q86VX2 200 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 RASL10AQ92737 203 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 NAT8Q9UHE5 227 aa9.89□□□□□ -0.83
USF1-209ENST00000529476 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
USF1-209ENST00000529476 RPS20P60866 119 aaKnown RBP9.88□□□□□ -0.83
USF1-209ENST00000529476 RPL23P62829 140 aaKnown RBP9.88□□□□□ -0.83
USF1-209ENST00000529476 ZNF876PQ49A33 203 aa9.88□□□□□ -0.83
USF1-209ENST00000529476 C18orf15Q96N68 181 aa9.88□□□□□ -0.83
USF1-209ENST00000529476 RPP21Q9H633 154 aaKnown RBP9.88□□□□□ -0.83
USF1-209ENST00000529476 SCRT2Q9NQ03 307 aa9.88□□□□□ -0.83
USF1-209ENST00000529476 STARD9Q9P2P6 4700 aa9.88□□□□□ -0.83
USF1-209ENST00000529476 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 F5H768 121 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 ERVFC1-1P60608 527 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 ADIRFQ15847 76 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 UQCC3Q6UW78 93 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 FAM231DQ6ZW35 169 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 PTH2Q96A98 100 aa9.87□□□□□ -0.83
USF1-209ENST00000529476 KLK5Q9Y337 293 aaPredicted RBP9.87□□□□□ -0.83
USF1-209ENST00000529476 NACAE9PAV3 2078 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 IGLL5B9A064 214 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 GATCO43716 136 aaKnown RBP9.86□□□□□ -0.83
USF1-209ENST00000529476 MED14OSP0DP75 135 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 HOXA5P20719 270 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 POM121L12Q8N7R1 296 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 ISOC2Q96AB3 205 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 PHLDA3Q9Y5J5 127 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 CSMD3Q7Z407 3707 aa9.86□□□□□ -0.83
USF1-209ENST00000529476 MUC21A0A0G2JKD1 596 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 MUC21A0A140T8X8 626 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 XKRY2A2RUG3 117 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 M0R381 172 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 SNAI2O43623 268 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 IGLC6P0CF74 106 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 OR10AG1Q8NH19 301 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 TPPP3Q9BW30 176 aa9.85□□□□□ -0.83
USF1-209ENST00000529476 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
USF1-209ENST00000529476 IGHV4-4A0A075B6R2 117 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 TRAV4A0A0B4J268 109 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 TMEM88Q6PEY1 159 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 ZFP82Q8N141 532 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 SYT8Q8NBV8 401 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 OR4C5Q8NGB2 326 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 JPT2Q9H910 190 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 OSTCQ9NRP0 149 aa9.84□□□□□ -0.83
USF1-209ENST00000529476 TMEM218A2RU14 115 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 RS1O15537 224 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 SSTP61278 116 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 FHL2Q14192 279 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 PIK3CD-AS1Q5SR53 167 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 CFAP126Q5VTH2 177 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 C15orf54Q8N8G6 183 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 SFRP2Q96HF1 295 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 NDUFAF3Q9BU61 184 aa9.83□□□□□ -0.84
USF1-209ENST00000529476 A8MWL6 223 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 NXPH4O95158 308 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 CT83Q5H943 113 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 SPANXN1Q5VSR9 72 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 LYZL1Q6UWQ5 148 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 OR10G8Q8NGN5 311 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 GTSF1Q8WW33 167 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 APLNQ9ULZ1 77 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 V9GYV3 84 aa9.82□□□□□ -0.84
USF1-209ENST00000529476 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 A0A0J9YY99 117 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 A0A1W2PPQ1 181 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 A8MWV9 139 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 F8W036 122 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 FAM210BQ96KR6 192 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 SAMD10Q9BYL1 202 aa9.81□□□□□ -0.84
USF1-209ENST00000529476 F2Z2F3 143 aa9.8□□□□□ -0.84
USF1-209ENST00000529476 CTRLP40313 264 aa9.8□□□□□ -0.84
USF1-209ENST00000529476 VSIG2Q96IQ7 327 aa9.8□□□□□ -0.84
USF1-209ENST00000529476 A0A087WWL8 130 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 CRYBA4P53673 196 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 CACNG7P62955 275 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 PNRC1Q12796 327 aaPredicted RBP9.79□□□□□ -0.84
USF1-209ENST00000529476 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 SEC11CQ9BY50 192 aa9.79□□□□□ -0.84
USF1-209ENST00000529476 MSRB1Q9NZV6 116 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms