RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 SOCS3O14543 225 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 CDKN1BP46527 198 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 LAGE3Q14657 143 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 NAA38Q9BRA0 125 aaKnown RBP11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 ATP5LO75964 103 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 SCGB2A2Q13296 93 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
TM9SF1-208ENST00000529332 GAGE12BA1L429 117 aa11.91□□□□□ -0.5
TM9SF1-208ENST00000529332 H3BUT2 72 aa11.91□□□□□ -0.5
TM9SF1-208ENST00000529332 NDUFA4O00483 81 aa11.91□□□□□ -0.5
TM9SF1-208ENST00000529332 DPM2O94777 84 aa11.91□□□□□ -0.5
TM9SF1-208ENST00000529332 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 PCP4P48539 62 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 BLCAPP62952 87 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 C21orf62-AS1Q17RA5 79 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 TM4SF20Q53R12 229 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 UFSP1Q6NVU6 142 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 LINC00477Q96M19 166 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 KLK15Q9H2R5 256 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 SMPXQ9UHP9 88 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 PSMG4Q5JS54 123 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 RAB37Q96AX2 223 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 MRPL35Q9NZE8 188 aaKnown RBP11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 ZNF580Q9UK33 172 aa11.9□□□□□ -0.5
TM9SF1-208ENST00000529332 A0A0G2JLM5 398 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 OR10J6PQ8NGY7 276 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 MYOZ3Q8TDC0 251 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 MRAP2Q96G30 205 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 HIGD1BQ9P298 99 aa11.89□□□□□ -0.51
TM9SF1-208ENST00000529332 F6UB75 175 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 H3BUA1 57 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 M0R381 172 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 OVOL1O14753 267 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 Q6ZS46 218 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
TM9SF1-208ENST00000529332 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 FAM19A4Q96LR4 140 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 CHAC1Q9BUX1 264 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 AKAP9Q99996 3911 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 A0A087WX48 190 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 BRI3O95415 125 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 FXYD2P54710 66 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 ANXA2RQ3ZCQ2 193 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 RASL10AQ92737 203 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 USMG5Q96IX5 58 aa11.87□□□□□ -0.51
TM9SF1-208ENST00000529332 IGKV3-7A0A075B6H7 116 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 GCSHP23434 173 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 K7EP34 96 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 PF4V1P10720 104 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 GTF2H5Q6ZYL4 71 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 MAPKAPK5-AS1Q8N8E1 139 aa11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 RPL39LQ96EH5 51 aaKnown RBP11.86□□□□□ -0.51
TM9SF1-208ENST00000529332 MXRA5Q9NR99 2828 aa11.85□□□□□ -0.51
TM9SF1-208ENST00000529332 S100A4P26447 101 aaKnown RBP11.85□□□□□ -0.51
TM9SF1-208ENST00000529332 ASIPP42127 132 aa11.85□□□□□ -0.51
TM9SF1-208ENST00000529332 A0A1W2PPM0 123 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 GNRH2O43555 120 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 EDN2P20800 178 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 APRG1Q8IVJ8 170 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 RHPN1-AS1Q9BWJ2 59 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 DPH3P1Q9H4G8 78 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 PHLDA3Q9Y5J5 127 aa11.84□□□□□ -0.51
TM9SF1-208ENST00000529332 ZNF469Q96JG9 3925 aaPredicted RBP11.83□□□□□ -0.51
TM9SF1-208ENST00000529332 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.83□□□□□ -0.52
TM9SF1-208ENST00000529332 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
TM9SF1-208ENST00000529332 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
TM9SF1-208ENST00000529332 TLN2Q9Y4G6 2542 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 K7ERJ3 54 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 SRD5A1P18405 259 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 CFHR3Q02985 330 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 ORMDL2Q53FV1 153 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 TOMM6Q96B49 74 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 C20orf78Q9BR46 151 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 ZNF702PQ9H963 129 aa11.82□□□□□ -0.52
TM9SF1-208ENST00000529332 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
TM9SF1-208ENST00000529332 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
TM9SF1-208ENST00000529332 DNAJC9-AS1A6NH13 148 aa11.81□□□□□ -0.52
TM9SF1-208ENST00000529332 MGPP08493 103 aa11.81□□□□□ -0.52
TM9SF1-208ENST00000529332 MED14OSP0DP75 135 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms