RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
TRIM3-208ENST00000529058 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
TRIM3-208ENST00000529058 C9JQL5 133 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 TMEM250H0YL14 139 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 NDUFS6O75380 124 aaKnown RBP9.36□□□□□ -0.91
TRIM3-208ENST00000529058 ZNF324O75467 553 aaPredicted RBP9.36□□□□□ -0.91
TRIM3-208ENST00000529058 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
TRIM3-208ENST00000529058 CEBPGP53567 150 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 DAZ2Q13117 558 aaKnown RBP9.36□□□□□ -0.91
TRIM3-208ENST00000529058 PSG3Q16557 428 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 SCXQ7RTU7 201 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 WFDC10BQ8IUB3 73 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 C10orf126Q8N4M7 172 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
TRIM3-208ENST00000529058 TCRAP04437 139 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 CRYGDP07320 174 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
TRIM3-208ENST00000529058 AKR1C3P42330 323 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 KIR3DS1Q14943 382 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 CYB561D1Q8N8Q1 229 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 HIST1H2BAQ96A08 127 aa9.35□□□□□ -0.91
TRIM3-208ENST00000529058 RPUSD4Q96CM3 377 aaKnown RBP9.35□□□□□ -0.91
TRIM3-208ENST00000529058 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
TRIM3-208ENST00000529058 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 K7EQM0 130 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 RS1O15537 224 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
TRIM3-208ENST00000529058 SFTA3P0C7M3 94 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 MRPL23Q16540 153 aaKnown RBP9.34□□□□□ -0.91
TRIM3-208ENST00000529058 NEGR1Q7Z3B1 354 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 ARL6IP6Q8N6S5 226 aa9.34□□□□□ -0.91
TRIM3-208ENST00000529058 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 PRAC2D3DTV9 90 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 ASIPP42127 132 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 ZNF674Q2M3X9 581 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 GFI1BQ5VTD9 330 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 PARLQ9H300 379 aa9.33□□□□□ -0.92
TRIM3-208ENST00000529058 UBE2G1P62253 170 aa9.32□□□□□ -0.92
TRIM3-208ENST00000529058 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
TRIM3-208ENST00000529058 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
TRIM3-208ENST00000529058 TRGV1A0A0A0MS02 117 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 TRAV34A0A0B4J273 112 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 RBAKDNA6NC62 111 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
TRIM3-208ENST00000529058 Q86TA4 180 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 FMC1Q96HJ9 113 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 SMIM7Q9BQ49 75 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 TNXBP22105 4242 aa9.31□□□□□ -0.92
TRIM3-208ENST00000529058 TRAV8-1A0A0A6YYK1 113 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 ZNF727A8MUV8 499 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 S100A9P06702 114 aaKnown RBP9.3□□□□□ -0.92
TRIM3-208ENST00000529058 CRYBA4P53673 196 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 TMEM183BQ1AE95 376 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 LINC00479Q96M42 142 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 VGLL1Q99990 258 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 PYGO2Q9BRQ0 406 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 GSN-AS1Q9NRJ2 163 aa9.3□□□□□ -0.92
TRIM3-208ENST00000529058 FBLL1A6NHQ2 334 aaKnown RBP9.29□□□□□ -0.92
TRIM3-208ENST00000529058 F8W036 122 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 IGHV3-53P01767 116 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 ADCYAP1P18509 176 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 GNG4P50150 75 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 FLI1Q01543 452 aaPredicted RBP9.29□□□□□ -0.92
TRIM3-208ENST00000529058 ERCC8Q13216 396 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 SLAQ13239 276 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 CENPWQ5EE01 88 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 TMEM78Q5T7P6 136 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 PRNTQ86SH4 94 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 Q8TAT8 98 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 SGK494Q96LW2 274 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 CHAC1Q9BUX1 264 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 KLF12Q9Y4X4 402 aa9.29□□□□□ -0.92
TRIM3-208ENST00000529058 TRBV20OR9-2A0A075B6H5 130 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 TRBV6-1A0A0K0K1D8 114 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 C9JCJ5 164 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 IGLV2-11P01706 119 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 SRIP30626 198 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 C9orf47Q6ZRZ4 202 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 C11orf72Q8NBR9 251 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 SEC11CQ9BY50 192 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 PSG8Q9UQ74 426 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 HHLA3Q9XRX5 114 aa9.28□□□□□ -0.92
TRIM3-208ENST00000529058 TRAV12-3A0A0B4J271 114 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 IBA57-AS1B1ANH7 110 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 KRBOX1C9JBD0 128 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 J3KRW8 73 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 LTAP01374 205 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 ZNF138P52744 262 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 CIRBP-AS1Q8TBR5 109 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 NDFIP1Q9BT67 221 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 AGPAT4-IT1Q9H0P7 198 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 Q9HAA7 133 aa9.27□□□□□ -0.93
TRIM3-208ENST00000529058 PGPEP1LA6NFU8 196 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms