RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TIMM9Q9Y5J7 89 aa6.02□□□□□ -1.45
SSBP3-212ENST00000528930 FAT1Q14517 4588 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 XKRY2A2RUG3 117 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 NDUFB4O95168 129 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 SLPIP03973 132 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 PRM2P04554 102 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 ZNF25P17030 456 aaPredicted RBP6.01□□□□□ -1.45
SSBP3-212ENST00000528930 PCP4P48539 62 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 FHITP49789 147 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 FAM167A-AS1Q96KT0 104 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 ATP5SQ99766 215 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 TXNDC17Q9BRA2 123 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 SLC25A2Q9BXI2 301 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 SMIM3Q9BZL3 60 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 APLNQ9ULZ1 77 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 ZFP30Q9Y2G7 519 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 RFNGQ9Y644 331 aa6.01□□□□□ -1.45
SSBP3-212ENST00000528930 TRBV19A0A075B6N1 114 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 TRAV12-2A0A075B6T6 113 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 TRAV10A0A0B4J240 114 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 TMEM189A5PLL7 270 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 MAP1LC3B2A6NCE7 125 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 K7EP13 123 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 ZNF253O75346 499 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 IFNA5P01569 189 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 PYYP10082 97 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 HIST1H1EP10412 219 aaKnown RBP6□□□□□ -1.45
SSBP3-212ENST00000528930 RHOBP62745 196 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 COTL1Q14019 142 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 LGALS9BQ3B8N2 356 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 COL5A1-AS1Q5SY13 56 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 KCNIP4Q6PIL6 250 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 TEX43Q6ZNM6 134 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 MIR17HGQ75NE6 70 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 ORAOV1Q8WV07 137 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 MAP1LC3BQ9GZQ8 125 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 SH3BGRL3Q9H299 93 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 DKK2Q9UBU2 259 aa6□□□□□ -1.45
SSBP3-212ENST00000528930 ZNF705GA8MUZ8 300 aaPredicted RBP5.99□□□□□ -1.45
SSBP3-212ENST00000528930 IGLL5B9A064 214 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 M0R3E3 92 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 INSP01308 110 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 SPART-AS1P0CW21 52 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 AZU1P20160 251 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 EMP1P54849 157 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 PDE6HQ13956 83 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 RRN3P1Q2M238 152 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 COX19Q49B96 90 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 FAM222AQ5U5X8 452 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 Q5VSD8 79 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 MRPL53Q96EL3 112 aaKnown RBP5.99□□□□□ -1.45
SSBP3-212ENST00000528930 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
SSBP3-212ENST00000528930 YTHDF2Q9Y5A9 579 aaKnown RBP5.99□□□□□ -1.45
SSBP3-212ENST00000528930 DEFB131BA0A096LNP1 70 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 PLAC8L1A1L4L8 177 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 C17orf112F2Z3M2 114 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 H7BYZ3 331 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 CT45A10P0DMU9 189 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 TSPOP30536 169 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 CDKN1BP46527 198 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 EXOC3-AS1Q8N2X6 119 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 SCGB1C1Q8TD33 95 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 FXYD5Q96DB9 178 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 MRPL32Q9BYC8 188 aaKnown RBP5.98□□□□□ -1.45
SSBP3-212ENST00000528930 MANBALQ9NQG1 85 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 KCNIP2Q9NS61 270 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 FUT9Q9Y231 359 aa5.98□□□□□ -1.45
SSBP3-212ENST00000528930 IGHV4-4A0A075B6R2 117 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 C20orf202A1L168 122 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 NBEAP1P0C6P0 100 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 Q0VG73 95 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 TMEM183BQ1AE95 376 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 FFAR4Q5NUL3 377 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 Q6ZR54 194 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 TMEM256Q8N2U0 113 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 OR10J6PQ8NGY7 276 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 BLNKQ8WV28 456 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 FAM19A4Q96LR4 140 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 ODF3Q96PU9 254 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 LINC01587Q99440 93 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 URGCP-MRPS24S4R325 110 aa5.97□□□□□ -1.45
SSBP3-212ENST00000528930 TEX48A0A1B0GUV7 120 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 KRTAP29-1A8MX34 341 aaPredicted RBP5.96□□□□□ -1.46
SSBP3-212ENST00000528930 M0R2N4 97 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 OR10J4P0C629 311 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 RPL23P62829 140 aaKnown RBP5.96□□□□□ -1.46
SSBP3-212ENST00000528930 RPL19P84098 196 aaKnown RBP5.96□□□□□ -1.46
SSBP3-212ENST00000528930 MEF2BQ02080 365 aaPredicted RBP5.96□□□□□ -1.46
SSBP3-212ENST00000528930 ERCC8Q13216 396 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 PET117Q6UWS5 81 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 PAXXQ9BUH6 204 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 AGPAT4-IT1Q9H0P7 198 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 LY96Q9Y6Y9 160 aa5.96□□□□□ -1.46
SSBP3-212ENST00000528930 LYRM9A8MSI8 78 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 KLLNB2CW77 178 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 F6UZH7 168 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 OR7C2O60412 319 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 PPBPP02775 128 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 PDZD11Q5EBL8 140 aa5.95□□□□□ -1.46
SSBP3-212ENST00000528930 C9orf47Q6ZRZ4 202 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms