RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 OR4C46A6NHA9 309 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
USF1-208ENST00000528768 HBDP02042 147 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 RPLP1P05386 114 aaKnown RBP8.84□□□□□ -0.99
USF1-208ENST00000528768 TSPOP30536 169 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
USF1-208ENST00000528768 MUC21Q5SSG8 566 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 APRG1Q8IVJ8 170 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 Q8N2B8 174 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 ZFAND2AQ8N6M9 145 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 MYOZ3Q8TDC0 251 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 WWC2-AS2Q96NR7 200 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
USF1-208ENST00000528768 IGKV3-7A0A075B6H7 116 aa8.83□□□□□ -1
USF1-208ENST00000528768 PPP1R17O96001 155 aa8.83□□□□□ -1
USF1-208ENST00000528768 PRB2P02812 416 aaPredicted RBP8.83□□□□□ -1
USF1-208ENST00000528768 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
USF1-208ENST00000528768 HNRNPA3P51991 378 aaKnown RBP8.83□□□□□ -1
USF1-208ENST00000528768 TDRG1Q3Y452 100 aa8.83□□□□□ -1
USF1-208ENST00000528768 PSMG4Q5JS54 123 aa8.83□□□□□ -1
USF1-208ENST00000528768 DPF1Q92782 380 aa8.83□□□□□ -1
USF1-208ENST00000528768 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
USF1-208ENST00000528768 MS4A6AQ9H2W1 248 aa8.83□□□□□ -1
USF1-208ENST00000528768 PEMTQ9UBM1 199 aa8.83□□□□□ -1
USF1-208ENST00000528768 TIMM8BQ9Y5J9 83 aaPredicted RBP8.83□□□□□ -1
USF1-208ENST00000528768 COL7A1Q02388 2944 aa8.82□□□□□ -1
USF1-208ENST00000528768 TNFRSF6BO95407 300 aa8.82□□□□□ -1
USF1-208ENST00000528768 NPYP01303 97 aa8.82□□□□□ -1
USF1-208ENST00000528768 IGLC3P0DOY3 106 aa8.82□□□□□ -1
USF1-208ENST00000528768 FAM159AQ6UWV7 190 aa8.82□□□□□ -1
USF1-208ENST00000528768 Q6ZN92 141 aa8.82□□□□□ -1
USF1-208ENST00000528768 WFDC3Q8IUB2 231 aa8.82□□□□□ -1
USF1-208ENST00000528768 OR2K2Q8NGT1 345 aa8.82□□□□□ -1
USF1-208ENST00000528768 RNF185Q96GF1 192 aa8.82□□□□□ -1
USF1-208ENST00000528768 C11orf21Q9P2W6 132 aa8.82□□□□□ -1
USF1-208ENST00000528768 PHLDA3Q9Y5J5 127 aa8.82□□□□□ -1
USF1-208ENST00000528768 H3BVH4 76 aa8.81□□□□□ -1
USF1-208ENST00000528768 Q8N8P6 123 aa8.81□□□□□ -1
USF1-208ENST00000528768 DCANP1Q8TF63 244 aa8.81□□□□□ -1
USF1-208ENST00000528768 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
USF1-208ENST00000528768 MSRB1Q9NZV6 116 aa8.81□□□□□ -1
USF1-208ENST00000528768 NOTCH3Q9UM47 2321 aa8.81□□□□□ -1
USF1-208ENST00000528768 IGHV4OR15-8A0A075B7B6 117 aa8.8□□□□□ -1
USF1-208ENST00000528768 A0A087WW49 117 aa8.8□□□□□ -1
USF1-208ENST00000528768 TRAV2A0A0B4J234 112 aa8.8□□□□□ -1
USF1-208ENST00000528768 LINC01546A6NGU7 62 aa8.8□□□□□ -1
USF1-208ENST00000528768 PRSS47A8MTI9 375 aa8.8□□□□□ -1
USF1-208ENST00000528768 LINC01619G3V211 115 aa8.8□□□□□ -1
USF1-208ENST00000528768 J3KRW8 73 aa8.8□□□□□ -1
USF1-208ENST00000528768 K7EQG2 157 aa8.8□□□□□ -1
USF1-208ENST00000528768 NCR2O95944 276 aa8.8□□□□□ -1
USF1-208ENST00000528768 FCER1GP30273 86 aa8.8□□□□□ -1
USF1-208ENST00000528768 HOXD3P31249 432 aaPredicted RBP8.8□□□□□ -1
USF1-208ENST00000528768 SYNJ2BPP57105 145 aa8.8□□□□□ -1
USF1-208ENST00000528768 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
USF1-208ENST00000528768 LINC01545Q5VT33 79 aa8.8□□□□□ -1
USF1-208ENST00000528768 ZNF575Q86XF7 245 aa8.8□□□□□ -1
USF1-208ENST00000528768 ATOH7Q8N100 152 aa8.8□□□□□ -1
USF1-208ENST00000528768 DPH3P1Q9H4G8 78 aa8.8□□□□□ -1
USF1-208ENST00000528768 MRPS16Q9Y3D3 137 aaKnown RBP8.8□□□□□ -1
USF1-208ENST00000528768 C7orf71A4D174 169 aa8.79□□□□□ -1
USF1-208ENST00000528768 KLLNB2CW77 178 aa8.79□□□□□ -1
USF1-208ENST00000528768 SMKR1H3BMG3 65 aa8.79□□□□□ -1
USF1-208ENST00000528768 K7EMI3 77 aa8.79□□□□□ -1
USF1-208ENST00000528768 SMIM17P0DL12 118 aa8.79□□□□□ -1
USF1-208ENST00000528768 LGALS9BQ3B8N2 356 aa8.79□□□□□ -1
USF1-208ENST00000528768 PRR9Q5T870 116 aa8.79□□□□□ -1
USF1-208ENST00000528768 LGALS9CQ6DKI2 356 aa8.79□□□□□ -1
USF1-208ENST00000528768 Q6ZSV7 163 aa8.79□□□□□ -1
USF1-208ENST00000528768 DEFB125Q8N687 156 aa8.79□□□□□ -1
USF1-208ENST00000528768 IFI27L1Q96BM0 104 aa8.79□□□□□ -1
USF1-208ENST00000528768 AP1S3Q96PC3 154 aa8.79□□□□□ -1
USF1-208ENST00000528768 SNHG12Q9BXW3 62 aa8.79□□□□□ -1
USF1-208ENST00000528768 F6UB75 175 aa8.78□□□□□ -1
USF1-208ENST00000528768 H0Y8G0 127 aa8.78□□□□□ -1
USF1-208ENST00000528768 M0R381 172 aa8.78□□□□□ -1
USF1-208ENST00000528768 ATP5LO75964 103 aa8.78□□□□□ -1
USF1-208ENST00000528768 ZNF688P0C7X2 276 aa8.78□□□□□ -1
USF1-208ENST00000528768 EVI2AP22794 236 aa8.78□□□□□ -1
USF1-208ENST00000528768 G0S2P27469 103 aa8.78□□□□□ -1
USF1-208ENST00000528768 TFPI2P48307 235 aa8.78□□□□□ -1
USF1-208ENST00000528768 C10orf99Q6UWK7 81 aa8.78□□□□□ -1
USF1-208ENST00000528768 FOXI2Q6ZQN5 318 aa8.78□□□□□ -1
USF1-208ENST00000528768 LINC00173Q6ZV60 143 aa8.78□□□□□ -1
USF1-208ENST00000528768 SYT8Q8NBV8 401 aa8.78□□□□□ -1
USF1-208ENST00000528768 C4orf3Q8WVX3 66 aa8.78□□□□□ -1
USF1-208ENST00000528768 A0A0J9YX75 114 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 IGLL1P15814 213 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 TCTEX1D4Q5JR98 221 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 COL5A1-AS1Q5SY13 56 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 SLC25A34Q6PIV7 304 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 OR1N2Q8NGR9 330 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 C20orf78Q9BR46 151 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 SCRT2Q9NQ03 307 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 GOLT1BQ9Y3E0 138 aa8.77□□□□□ -1.01
USF1-208ENST00000528768 LINC01549A6NIU2 74 aa8.76□□□□□ -1.01
USF1-208ENST00000528768 EREGO14944 169 aa8.76□□□□□ -1.01
USF1-208ENST00000528768 LAGE3Q14657 143 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms