RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 C15orf54Q8N8G6 183 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 TMEM75Q8N9X5 138 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 OR4C5Q8NGB2 326 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 FAM213BQ8TBF2 198 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 HIST1H2BAQ96A08 127 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 SH3BGRL3Q9H299 93 aa6.65□□□□□ -1.34
CHD7-208ENST00000528280 NACAE9PAV3 2078 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 TRAV8-1A0A0A6YYK1 113 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 TRAV4A0A0B4J268 109 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 IGHV3-16A0A0C4DH30 117 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 FAM74A7A6NL05 159 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 GNRH2O43555 120 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 IGHV3-53P01767 116 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 PFN1P07737 140 aaKnown RBP6.64□□□□□ -1.35
CHD7-208ENST00000528280 GNG5P63218 68 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 ZNF506Q5JVG8 444 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 MBD3L1Q8WWY6 194 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 PTH2Q96A98 100 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 TVP23CQ96ET8 276 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 C8orf49Q96NF6 230 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 TXNDC17Q9BRA2 123 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 TCEAL7Q9BRU2 100 aa6.64□□□□□ -1.35
CHD7-208ENST00000528280 EIF5A2Q9GZV4 153 aaKnown RBP6.64□□□□□ -1.35
CHD7-208ENST00000528280 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
CHD7-208ENST00000528280 RBFOX3A6NFN3 312 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 FABP5P3A8MUU1 101 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 C9JCJ5 164 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 SIVA1O15304 175 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 GCGP01275 180 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 IFNA1P01562 189 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 FHITP49789 147 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 LYPD5Q6UWN5 251 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 ZFP30Q9Y2G7 519 aa6.63□□□□□ -1.35
CHD7-208ENST00000528280 A0A087WWC5 75 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 GGTLC3B5MD39 225 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 IGLV2-11P01706 119 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 TYMSP04818 313 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 SRIP30626 198 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 ZNF876PQ49A33 203 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 ZNF479Q96JC4 524 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 SGK494Q96LW2 274 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 ARL2-SNX15V9GYD0 113 aa6.62□□□□□ -1.35
CHD7-208ENST00000528280 DNAH17Q9UFH2 4485 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 MAP1LC3B2A6NCE7 125 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 B4DEV8 164 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 C9JQL5 133 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 K7EQD1 137 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 PEX7O00628 323 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 MT-ND4LP03901 98 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 S100A9P06702 114 aaKnown RBP6.61□□□□□ -1.35
CHD7-208ENST00000528280 GYPEP15421 78 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 PNRC1Q12796 327 aaPredicted RBP6.61□□□□□ -1.35
CHD7-208ENST00000528280 ZNF726P1Q15940 193 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 PIK3CD-AS1Q5SR53 167 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 NFE4Q86UQ8 179 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 MAP1LC3BQ9GZQ8 125 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 FAT2Q9NYQ8 4349 aa6.61□□□□□ -1.35
CHD7-208ENST00000528280 C7orf77A4D0Y5 90 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 NXPH4O95158 308 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
CHD7-208ENST00000528280 S100A4P26447 101 aaKnown RBP6.6□□□□□ -1.35
CHD7-208ENST00000528280 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
CHD7-208ENST00000528280 TIRAPP58753 221 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 UBE2G2P60604 165 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 RAB5BP61020 215 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 CBLN2Q8IUK8 224 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 SFT2D1Q8WV19 159 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 FMC1Q96HJ9 113 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 PRADC1Q9BSG0 188 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 BIN3Q9NQY0 253 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 DNAH2Q9P225 4427 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
CHD7-208ENST00000528280 PKD1P98161 4303 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 TRBV6-1A0A0K0K1D8 114 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 TRBV6-4A0A1B0GX49 114 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 COLCA2A8K830 154 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 A8MWV9 139 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 EREGO14944 169 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 RS1O15537 224 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 BCL2P10415 239 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 EVI2AP22794 236 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 FGF8P55075 233 aaPredicted RBP6.59□□□□□ -1.35
CHD7-208ENST00000528280 UBE2G1P62253 170 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 TNP2Q05952 138 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 CST9LP1Q5W188 147 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 COX8CQ7Z4L0 72 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 LINC00518Q8N0U6 118 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 LINC00479Q96M42 142 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 C9orf85Q96MD7 179 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 LY96Q9Y6Y9 160 aa6.59□□□□□ -1.35
CHD7-208ENST00000528280 TRAV34A0A0B4J273 112 aa6.58□□□□□ -1.36
CHD7-208ENST00000528280 TMEM250H0YL14 139 aa6.58□□□□□ -1.36
CHD7-208ENST00000528280 M0R036 132 aa6.58□□□□□ -1.36
CHD7-208ENST00000528280 MGST1P10620 155 aaKnown RBP6.58□□□□□ -1.36
CHD7-208ENST00000528280 GATA1P15976 413 aaPredicted RBP6.58□□□□□ -1.36
CHD7-208ENST00000528280 ASIPP42127 132 aa6.58□□□□□ -1.36
CHD7-208ENST00000528280 RHOHQ15669 191 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms