RNA–Protein interactions for RNA: ENST00000528078.1

RAB29-208, Transcript of RAB29, member RAS oncogene family, human

TSL 5

Gene RAB29, Length 1,571 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB29-208	ENST00000528078	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.77	□□□□□ -0.53
RAB29-208	ENST00000528078	VAMP8	Q9BV40	100 aa		11.77	□□□□□ -0.53
RAB29-208	ENST00000528078	RETN	Q9HD89	108 aa		11.77	□□□□□ -0.53
RAB29-208	ENST00000528078	PSG8	Q9UQ74	426 aa		11.77	□□□□□ -0.53
RAB29-208	ENST00000528078		M0R3E3	92 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	HSBP1	O75506	76 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	DUSP14	O95147	198 aa	Known RBP	11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	IGKV3-20	P01619	116 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	PRB4	P10163	310 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	CAMP	P49913	170 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	FOXA3	P55318	350 aa	Predicted RBP	11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	OR2D3	Q8NGH3	330 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	RCHY1	Q96PM5	261 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078		U3KQK5	164 aa		11.76	□□□□□ -0.53
RAB29-208	ENST00000528078	PRAC2	D3DTV9	90 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	HIST1H1A	Q02539	215 aa	Predicted RBP	11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	AMTN	Q6UX39	209 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	GTSF1	Q8WW33	167 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	OVOL2	Q9BRP0	275 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	TP53TG1	Q9Y2A0	90 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	TRAV8-1	A0A0A6YYK1	113 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	KRTDAP	P60985	99 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	RIG	Q13278	110 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	RNF183	Q96D59	192 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	PGLYRP4	Q96LB8	373 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	C2orf88	Q9BSF0	95 aa		11.75	□□□□□ -0.53
RAB29-208	ENST00000528078	SPRY2	O43597	315 aa		11.74	□□□□□ -0.53
RAB29-208	ENST00000528078	SAPCD1	Q5SSQ6	148 aa		11.74	□□□□□ -0.53
RAB29-208	ENST00000528078	GATD1	Q8NB37	220 aa		11.74	□□□□□ -0.53
RAB29-208	ENST00000528078	OR10J6P	Q8NGY7	276 aa		11.74	□□□□□ -0.53
RAB29-208	ENST00000528078	CHCHD1	Q96BP2	118 aa	Known RBP	11.74	□□□□□ -0.53
RAB29-208	ENST00000528078	ZC2HC1A	Q96GY0	325 aa		11.74	□□□□□ -0.53
RAB29-208	ENST00000528078		A0A1B0GUT8	65 aa		11.73	□□□□□ -0.53
RAB29-208	ENST00000528078	COX8C	Q7Z4L0	72 aa		11.73	□□□□□ -0.53
RAB29-208	ENST00000528078	CSNK1G2-AS1	Q8NCQ2	148 aa		11.73	□□□□□ -0.53
RAB29-208	ENST00000528078	C1QTNF4	Q9BXJ3	329 aa		11.73	□□□□□ -0.53
RAB29-208	ENST00000528078	XCL2	Q9UBD3	114 aa		11.73	□□□□□ -0.53
RAB29-208	ENST00000528078	FXYD7	P58549	80 aa		11.72	□□□□□ -0.53
RAB29-208	ENST00000528078	PMCHL1	Q16048	86 aa		11.72	□□□□□ -0.53
RAB29-208	ENST00000528078	NDFIP1	Q9BT67	221 aa		11.72	□□□□□ -0.53
RAB29-208	ENST00000528078	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.72	□□□□□ -0.53
RAB29-208	ENST00000528078		M0R2Z0	102 aa		11.71	□□□□□ -0.53
RAB29-208	ENST00000528078	NTF3	P20783	257 aa		11.71	□□□□□ -0.53
RAB29-208	ENST00000528078	RPS20	P60866	119 aa	Known RBP	11.71	□□□□□ -0.53
RAB29-208	ENST00000528078	RNASEK	Q6P5S7	137 aa	Known RBP	11.71	□□□□□ -0.53
RAB29-208	ENST00000528078	NIT1	Q86X76	327 aa		11.71	□□□□□ -0.53
RAB29-208	ENST00000528078	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.71	□□□□□ -0.54
RAB29-208	ENST00000528078	MIEN1	Q9BRT3	115 aa		11.71	□□□□□ -0.54
RAB29-208	ENST00000528078	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.7	□□□□□ -0.54
RAB29-208	ENST00000528078		M0R143	59 aa		11.7	□□□□□ -0.54
RAB29-208	ENST00000528078	IGKV2D-40	P01614	121 aa	Predicted RBP	11.7	□□□□□ -0.54
RAB29-208	ENST00000528078	C3orf79	P0CE67	100 aa		11.7	□□□□□ -0.54
RAB29-208	ENST00000528078	SPINK13	Q1W4C9	94 aa		11.7	□□□□□ -0.54
RAB29-208	ENST00000528078	C9orf47	Q6ZRZ4	202 aa		11.69	□□□□□ -0.54
RAB29-208	ENST00000528078		Q8N976	141 aa		11.69	□□□□□ -0.54
RAB29-208	ENST00000528078	OR11H2	Q8NH07	326 aa		11.69	□□□□□ -0.54
RAB29-208	ENST00000528078	PPP1R14D	Q9NXH3	145 aa		11.69	□□□□□ -0.54
RAB29-208	ENST00000528078	PAM16	Q9Y3D7	125 aa		11.69	□□□□□ -0.54
RAB29-208	ENST00000528078	C20orf202	A1L168	122 aa		11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	CRX	O43186	299 aa	Predicted RBP	11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	BTF3	P20290	206 aa	Known RBP	11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	ERCC8	Q13216	396 aa		11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	ODF3	Q96PU9	254 aa		11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	VGLL1	Q99990	258 aa		11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	AGPAT4-IT1	Q9H0P7	198 aa		11.68	□□□□□ -0.54
RAB29-208	ENST00000528078	TMEM189	A5PLL7	270 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	RBAKDN	A6NC62	111 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	OR5AL1	P0C617	328 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	CDKN1B	P46527	198 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	FAM19A2	Q8N3H0	131 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	LINC00477	Q96M19	166 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	SST	P61278	116 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	ZNF705A	Q6ZN79	300 aa	Predicted RBP	11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	LINC00469	Q8N7U9	141 aa		11.67	□□□□□ -0.54
RAB29-208	ENST00000528078	TRAV12-2	A0A075B6T6	113 aa		11.66	□□□□□ -0.54
RAB29-208	ENST00000528078	TSPO	P30536	169 aa		11.66	□□□□□ -0.54
RAB29-208	ENST00000528078	TMEM78	Q5T7P6	136 aa		11.66	□□□□□ -0.54
RAB29-208	ENST00000528078	ZNF493	Q6ZR52	646 aa		11.66	□□□□□ -0.54
RAB29-208	ENST00000528078	FAM19A4	Q96LR4	140 aa		11.66	□□□□□ -0.54
RAB29-208	ENST00000528078	SH2D1A	O60880	128 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	INS	P01308	110 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	ARMS2	P0C7Q2	107 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	CTRL	P40313	264 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	SPATA45	Q537H7	98 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	C1orf158	Q8N1D5	194 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	C8orf49	Q96NF6	230 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	EDA2R	Q9HAV5	297 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	UQCR10	Q9UDW1	63 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078		X6R8D5	127 aa		11.65	□□□□□ -0.54
RAB29-208	ENST00000528078	LINC00614	P0C842	121 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	LEP	P41159	167 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	CRIP1	P50238	77 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	ZNF138	P52744	262 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	KIR3DS1	Q14943	382 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	TMEM70	Q9BUB7	260 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	GOLT1B	Q9Y3E0	138 aa		11.64	□□□□□ -0.55
RAB29-208	ENST00000528078	EREG	O14944	169 aa		11.63	□□□□□ -0.55
RAB29-208	ENST00000528078		Q8TAT8	98 aa		11.63	□□□□□ -0.55
RAB29-208	ENST00000528078	IGHV3OR16-12	A0A075B7B8	117 aa		11.62	□□□□□ -0.55
RAB29-208	ENST00000528078	TRBV7-9	A0A0J9YWB2	115 aa		11.62	□□□□□ -0.55

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