RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 IGKV3D-20A0A0C4DH25 116 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 EREGO14944 169 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 CIDEAO60543 219 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
CAPN1-211ENST00000527739 ASIPP42127 132 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 FHITP49789 147 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 UBE2G1P62253 170 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 LGALSLQ3ZCW2 172 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-211ENST00000527739 NFE4Q86UQ8 179 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 KCNRGQ8N5I3 272 aa13.11□□□□□ -0.31
CAPN1-211ENST00000527739 A0A1B0GV50 99 aa13.1□□□□□ -0.31
CAPN1-211ENST00000527739 B4DEV8 164 aa13.1□□□□□ -0.31
CAPN1-211ENST00000527739 RHOHQ15669 191 aa13.1□□□□□ -0.31
CAPN1-211ENST00000527739 M0R036 132 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 Q6ZRN7 208 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-211ENST00000527739 MAPKAPK5-AS1Q8N8E1 139 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 FAM213BQ8TBF2 198 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 SFT2D1Q8WV19 159 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 ZNF471Q9BX82 626 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-211ENST00000527739 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
CAPN1-211ENST00000527739 TRBV6-4A0A1B0GX49 114 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 GRIFINA4D1Z8 144 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 CDK2AP2O75956 126 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 CRYGDP07320 174 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 ERVFC1-1P60608 527 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 OR10J3Q5JRS4 329 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 PTH2Q96A98 100 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 ZC2HC1AQ96GY0 325 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 FMC1Q96HJ9 113 aa13.08□□□□□ -0.32
CAPN1-211ENST00000527739 TRAV8-6A0A0B4J262 113 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 A0A0D9SG52 128 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 PAGE4O60829 102 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 MGST1P10620 155 aaKnown RBP13.07□□□□□ -0.32
CAPN1-211ENST00000527739 ZNF345Q14585 488 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
CAPN1-211ENST00000527739 TMSB15BA0A087X1C1 80 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 IGHV3-38A0A0C4DH36 116 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 H3BVH4 76 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 SH2D1AO60880 128 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 SEC11BP0C7V7 166 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 FUSP35637 526 aaKnown RBP eCLIP13.06□□□□□ -0.32
CAPN1-211ENST00000527739 AKR1C3P42330 323 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 CRIP1P50238 77 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 FAM162BQ5T6X4 162 aa13.06□□□□□ -0.32
CAPN1-211ENST00000527739 HMSDA8MTL9 139 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 A8MWV9 139 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 KRBOX1C9JBD0 128 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 K7EP13 123 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 BCL2L11O43521 198 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 TIRAPP58753 221 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 C10orf126Q8N4M7 172 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 SYT8Q8NBV8 401 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 ATP6V0E2Q8NHE4 81 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 PARLQ9H300 379 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 JPT2Q9H910 190 aa13.05□□□□□ -0.32
CAPN1-211ENST00000527739 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 UMAD1C9J7I0 102 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 PFDN1O60925 122 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 ARMS2P0C7Q2 107 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 GAGE1Q13065 139 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 GAGE4Q13068 117 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 GAGE5Q13069 117 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 GAGE13Q4V321 117 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 DMRTA1Q5VZB9 504 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 Q6ZSN1 163 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 TCEAL7Q9BRU2 100 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 IL36BQ9NZH7 164 aa13.04□□□□□ -0.32
CAPN1-211ENST00000527739 IGHV3-30P01768 117 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 IGHV3-33P01772 117 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 IGHV3-30-3P0DP02 117 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 IGHV3-30-5P0DP03 117 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 EIF5AP63241 154 aaKnown RBP13.03□□□□□ -0.32
CAPN1-211ENST00000527739 MBD3L1Q8WWY6 194 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
CAPN1-211ENST00000527739 PSCAO43653 123 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 LTAP01374 205 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 H2AFB1P0C5Y9 115 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 LELP1Q5T871 98 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 ZFP2Q6ZN57 461 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 SAMD10Q9BYL1 202 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 GTSF1LQ9H1H1 148 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 PHLDA3Q9Y5J5 127 aa13.02□□□□□ -0.33
CAPN1-211ENST00000527739 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 M0R381 172 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 TPT1P13693 172 aaKnown RBP13.01□□□□□ -0.33
CAPN1-211ENST00000527739 ZNF674Q2M3X9 581 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 PIK3CD-AS1Q5SR53 167 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 FAM74A4Q5TZK3 123 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 COX8CQ7Z4L0 72 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 Q9HAA7 133 aa13.01□□□□□ -0.33
CAPN1-211ENST00000527739 A0A087WTM6 91 aa13□□□□□ -0.33
CAPN1-211ENST00000527739 LINC01556Q5JQF7 62 aa13□□□□□ -0.33
CAPN1-211ENST00000527739 Q8N1X5 172 aa13□□□□□ -0.33
CAPN1-211ENST00000527739 A0A087WWL8 130 aa12.99□□□□□ -0.33
CAPN1-211ENST00000527739 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms