RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 TCF21O43680 179 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 HBDP02042 147 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 ZNF124Q15973 351 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 DPF1Q92782 380 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 SPRY2O43597 315 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 IGKV3-20P01619 116 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 GOLT1BQ9Y3E0 138 aa12.94□□□□□ -0.34
PCDHA6-202ENST00000527624 NPSP0C0P6 89 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 OR1N2Q8NGR9 330 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 EVI2AP22794 236 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 FXYD7P58549 80 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 SMR3AQ99954 134 aa12.93□□□□□ -0.34
PCDHA6-202ENST00000527624 SETD2Q9BYW2 2564 aaPredicted RBP12.92□□□□□ -0.34
PCDHA6-202ENST00000527624 GAS8-AS1O95177 125 aa12.92□□□□□ -0.34
PCDHA6-202ENST00000527624 APRG1Q8IVJ8 170 aa12.92□□□□□ -0.34
PCDHA6-202ENST00000527624 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
PCDHA6-202ENST00000527624 TRBV7-9A0A0J9YWB2 115 aa12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 A0A1W2PRX2 142 aa12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 SNAI2O43623 268 aa12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 LGALS9BQ3B8N2 356 aa12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 LGALS9CQ6DKI2 356 aa12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 DLX4Q92988 240 aaPredicted RBP12.91□□□□□ -0.34
PCDHA6-202ENST00000527624 A0A0J9YX75 114 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 KLLNB2CW77 178 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 GNRH2O43555 120 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 S100A4P26447 101 aaKnown RBP12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 MPV17L2Q567V2 206 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 OR9G4Q8NGQ1 327 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 SORL1Q92673 2214 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 ASIPP42127 132 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 IFI27L1Q96BM0 104 aa12.9□□□□□ -0.34
PCDHA6-202ENST00000527624 ORAOV1Q8WV07 137 aa12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 ANK3Q12955 4377 aaKnown RBP12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 M0R381 172 aa12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 COX8AP10176 69 aa12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
PCDHA6-202ENST00000527624 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 NUDT3O95989 172 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 CD28P10747 220 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 CACNG7P62955 275 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 COX11Q9Y6N1 276 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
PCDHA6-202ENST00000527624 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
PCDHA6-202ENST00000527624 Q6ZVH6 145 aa12.87□□□□□ -0.35
PCDHA6-202ENST00000527624 TMEM61Q8N0U2 210 aa12.87□□□□□ -0.35
PCDHA6-202ENST00000527624 RNASE1P07998 156 aaKnown RBP12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 BVES-AS1Q5T3Y7 98 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 RAX2Q96IS3 184 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 PHLDA3Q9Y5J5 127 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 C7orf71A4D174 169 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 AGRNO00468 2067 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 LEPP41159 167 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 SPINK13Q1W4C9 94 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 C12orf54Q6X4T0 127 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 LINC01006Q8NI28 216 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 HIVEP2P31629 2446 aa12.86□□□□□ -0.35
PCDHA6-202ENST00000527624 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 FCER1GP30273 86 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 ANKRD39Q53RE8 183 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 FAM159AQ6UWV7 190 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 DYNLRB2Q8TF09 96 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 KNCNA6PVL3 124 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 OR2K2Q8NGT1 345 aa12.85□□□□□ -0.35
PCDHA6-202ENST00000527624 DEFB131AP59861 70 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 C2orf91Q6ZV80 131 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 IGLV2-18A0A075B6J9 118 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 Q8N8P6 123 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 ZNF418Q8TF45 676 aaPredicted RBP12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 C18orf15Q96N68 181 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
PCDHA6-202ENST00000527624 CD7P09564 240 aa12.83□□□□□ -0.36
PCDHA6-202ENST00000527624 FGF6P10767 208 aa12.83□□□□□ -0.36
PCDHA6-202ENST00000527624 DEFB125Q8N687 156 aa12.83□□□□□ -0.36
PCDHA6-202ENST00000527624 NRACQ8N912 160 aa12.83□□□□□ -0.36
PCDHA6-202ENST00000527624 PRSS47A8MTI9 375 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 CDKN1BP46527 198 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 WNK1Q9H4A3 2382 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 MED14OSP0DP75 135 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 HILS1P60008 231 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
PCDHA6-202ENST00000527624 BAHCC1Q9P281 2608 aa12.81□□□□□ -0.36
PCDHA6-202ENST00000527624 CCL24O00175 119 aa12.81□□□□□ -0.36
PCDHA6-202ENST00000527624 DEFB114Q30KQ6 69 aa12.81□□□□□ -0.36
PCDHA6-202ENST00000527624 CD300EQ496F6 205 aaPredicted RBP12.81□□□□□ -0.36
PCDHA6-202ENST00000527624 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
PCDHA6-202ENST00000527624 OTOGQ6ZRI0 2925 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms