RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TXNDC17Q9BRA2 123 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 SAMD10Q9BYL1 202 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 APLNQ9ULZ1 77 aa3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 KLK5Q9Y337 293 aaPredicted RBP3.23□□□□□ -1.89
CHMP4A-202ENST00000524955 TRGV4A0A0C4DH28 118 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 TEX48A0A1B0GUV7 120 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 C19orf71A6NCJ1 209 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 P01737 135 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 FHL2Q14192 279 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 ADIRFQ15847 76 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 LINC01559Q495D7 138 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 CLLU1Q5K131 121 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 FAM74A4Q5TZK3 123 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 CFAP126Q5VTH2 177 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 LINC01551Q86U37 167 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 COMMD7Q86VX2 200 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 OR4C5Q8NGB2 326 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 SPXQ9BT56 116 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 MSRB1Q9NZV6 116 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 Q9UF83 564 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
CHMP4A-202ENST00000524955 IGLV2-18A0A075B6J9 118 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 RS1O15537 224 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 PAX4O43316 350 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 GATCO43716 136 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 P0DMU3 169 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM231AP0DMU4 169 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM231CP0DMU5 169 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 FOXA3P55318 350 aaPredicted RBP3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 ERVFC1-1P60608 527 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 RPL23P62829 140 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 TMEM241Q24JQ0 296 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 SOHLH1Q5JUK2 328 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 SPANXN1Q5VSR9 72 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 LYZL1Q6UWQ5 148 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 FER1L6-AS1Q8NA97 138 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 DEFB104AQ8WTQ1 72 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 RASL10AQ92737 203 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 PGLYRP4Q96LB8 373 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 NDUFAF3Q9BU61 184 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 RPP21Q9H633 154 aaKnown RBP3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 HHLA3Q9XRX5 114 aa3.21□□□□□ -1.9
CHMP4A-202ENST00000524955 TRAV4A0A0B4J268 109 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 LCE6AA0A183 80 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GAGE12JA6NER3 117 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 M0R2N4 97 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 SNAI2O43623 268 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 CRYGDP07320 174 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 MGPP08493 103 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 IGLC6P0CF74 106 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GYPEP15421 78 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 ADCYAP1P18509 176 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 CRYBA4P53673 196 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GAGE1Q13065 139 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GAGE4Q13068 117 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GAGE5Q13069 117 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 LGALS9BQ3B8N2 356 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GAGE13Q4V321 117 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 UBE2DNLQ8IWF7 75 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 SYT8Q8NBV8 401 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 GTSF1Q8WW33 167 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 LINC00476Q8WZB0 136 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 SCRT2Q9NQ03 307 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 NAT8Q9UHE5 227 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 PRO0255Q9UI72 69 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 V9GYV3 84 aa3.2□□□□□ -1.9
CHMP4A-202ENST00000524955 STAB2Q8WWQ8 2551 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 F5H697 171 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 NTF3P20783 257 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 EVI2AP22794 236 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 RPS20P60866 119 aaKnown RBP3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 TWIST1Q15672 202 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 ZNF56Q15929 161 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 ESRGQ1W209 222 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 FAM74A3Q4VXF1 159 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 DNLZQ5SXM8 178 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 UFSP1Q6NVU6 142 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 ZFP82Q8N141 532 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 OR10G8Q8NGN5 311 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 SMIM12Q96EX1 92 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 SSBP4Q9BWG4 385 aaPredicted RBP3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 BIN3Q9NQY0 253 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 LINC00588Q9Y4M8 146 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
CHMP4A-202ENST00000524955 TRAV26-2A0A0B4J265 109 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 IGHV3-38A0A0C4DH36 116 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 TMEM218A2RU14 115 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 XKRY2A2RUG3 117 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 LINC00862A6NCI5 91 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 HIGD1CA8MV81 97 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 A8MWL6 223 aa3.18□□□□□ -1.9
CHMP4A-202ENST00000524955 A8MWV9 139 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms