RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, human

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-213	ENST00000524516	RPL36A	P83881	106 aa	Known RBP	4.66	□□□□□ -1.66
PUM1-213	ENST00000524516	PDE6H	Q13956	83 aa		4.66	□□□□□ -1.66
PUM1-213	ENST00000524516	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.66	□□□□□ -1.66
PUM1-213	ENST00000524516	RPL36AL	Q969Q0	106 aa	Known RBP	4.66	□□□□□ -1.66
PUM1-213	ENST00000524516	STRAP	Q9Y3F4	350 aa	Known RBP	4.66	□□□□□ -1.66
PUM1-213	ENST00000524516	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.65	□□□□□ -1.67
PUM1-213	ENST00000524516		K7EPK0	472 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	PTTG1IP	P53801	180 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	S100A10	P60903	97 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	GAGE6	Q13070	117 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	FAM74A4	Q5TZK3	123 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	LYZL2	Q7Z4W2	148 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	TERB2	Q8NHR7	220 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	TXNL4B	Q9NX01	149 aa	Known RBP	4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	COMMD3	Q9UBI1	195 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	TPRKB	Q9Y3C4	175 aa		4.65	□□□□□ -1.67
PUM1-213	ENST00000524516	TRAV6	A0A075B6T7	132 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516		A0A0B4J2A0	478 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516		F6UZH7	168 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	SDC2	P34741	201 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	CSN1S1	P47710	185 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	AQP4	P55087	323 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	UBE2D3	P61077	147 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	UBE2D2	P62837	147 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	UBE2NL	Q5JXB2	153 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	IZUMO2	Q6UXV1	221 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	CARD19	Q96LW7	228 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	VCX	Q9H320	206 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	NPVF	Q9HCQ7	196 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	MGAT4C	Q9UBM8	478 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	SHPK	Q9UHJ6	478 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	PHLDA3	Q9Y5J5	127 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	LENEP	Q9Y5L5	61 aa		4.64	□□□□□ -1.67
PUM1-213	ENST00000524516	TRBV7-3	A0A075B6L6	115 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516		A0A087X002	238 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	RHOD	O00212	210 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	SYNGR2	O43760	224 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	PYY	P10082	97 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	C9orf116	Q5BN46	136 aa	Predicted RBP	4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	EIF5AL1	Q6IS14	154 aa	Known RBP	4.63	□□□□□ -1.67
PUM1-213	ENST00000524516		Q6ZRG5	221 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	SNX29P2	Q8IUI4	249 aa		4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	C12orf45	Q8N5I9	185 aa	Predicted RBP	4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.63	□□□□□ -1.67
PUM1-213	ENST00000524516	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	RBAKDN	A6NC62	111 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	GAGE12H	A6NDE8	117 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516		A6NHS1	94 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	CD3D	P04234	171 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	SS18	Q15532	418 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	SAMD12	Q8N8I0	201 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	LINC00304	Q8N9R0	145 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	OR1L4	Q8NGR5	311 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	PTH2	Q96A98	100 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	CNBD2	Q96M20	576 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	RTBDN	Q9BSG5	229 aa	Predicted RBP	4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	JPT2	Q9H910	190 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	CCDC59	Q9P031	241 aa	Known RBP	4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	RABL2B	Q9UNT1	228 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	KCNIP3	Q9Y2W7	256 aa		4.62	□□□□□ -1.67
PUM1-213	ENST00000524516	TRBV10-1	A0A0K0K1A3	114 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	TSHB	P01222	138 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	SULT1A2	P50226	295 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	UFSP1	Q6NVU6	142 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	TSKU	Q8WUA8	353 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	PFDN5	Q99471	154 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	VCX3B	Q9H321	246 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	TMEM14C	Q9P0S9	112 aa		4.61	□□□□□ -1.67
PUM1-213	ENST00000524516	LOC107984640	A0A0U1RRK4	108 aa		4.6	□□□□□ -1.67
PUM1-213	ENST00000524516	DIRAS2	Q96HU8	199 aa		4.6	□□□□□ -1.67
PUM1-213	ENST00000524516	TRBV25-1	A0A075B6N4	114 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	LOC100506127	A0A0U1RQW1	187 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	SMIM31	A0A1B0GVY4	71 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	FNDC10	F2Z333	226 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	CFC1	P0CG37	223 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	FGF6	P10767	208 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	RNASE3	P12724	160 aa	Known RBP	4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	S100A4	P26447	101 aa	Known RBP	4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	KRTAP13-3	Q3SY46	172 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	LINC00526	Q96FQ7	95 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	FAM210A	Q96ND0	272 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	MGST2	Q99735	147 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	BCL7B	Q9BQE9	202 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	LINC00846	Q9NV44	126 aa		4.59	□□□□□ -1.67
PUM1-213	ENST00000524516	IGKV3OR2-268	A0A0C4DH90	116 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516		A0A1B0GVG6	124 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	RAB3D	O95716	219 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	METTL15P1	P0C7V9	234 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	ANXA3	P12429	323 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	RPL18A	Q02543	176 aa	Known RBP	4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	PIK3CD-AS1	Q5SR53	167 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	MIC13	Q5XKP0	118 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	C20orf203	Q8NBC4	194 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	DYNC2LI1	Q8TCX1	351 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	TREM1	Q9NP99	234 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	PSENEN	Q9NZ42	101 aa		4.58	□□□□□ -1.68
PUM1-213	ENST00000524516	RAB26	Q9ULW5	256 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms