RNA–Protein interactions for RNA: ENST00000524317.1

SCUBE2-208, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 2

Gene SCUBE2, Length 2,322 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-208ENST00000524317 LINC00173Q6ZV60 143 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 COX8CQ7Z4L0 72 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 OR4X2Q8NGF9 303 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 OR9G4Q8NGQ1 327 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 URB1-AS1Q96HZ7 61 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 SIGLEC8Q9NYZ4 499 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 HSPB8Q9UJY1 196 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 TNFRSF18Q9Y5U5 241 aa8.93□□□□□ -0.98
SCUBE2-208ENST00000524317 A0A1B0GW15 77 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 SIVA1O15304 175 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 FOXE3Q13461 319 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 Q8TAT8 98 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 PRR25Q96S07 402 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 USP9YO00507 2555 aaPredicted RBP8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 IGLV1-40P01703 118 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 IGHV3-11P01762 117 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 CFHR3Q02985 330 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 PRR31Q5SQ13 230 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 UNQ9165/PRO28630Q6UXU0 137 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 RNF182Q8N6D2 247 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 PTPN13Q12923 2485 aa8.92□□□□□ -0.98
SCUBE2-208ENST00000524317 PRAC2D3DTV9 90 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 FGF6P10767 208 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 LCNL1Q6ZST4 164 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 SLC50A1Q9BRV3 221 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 NBPF19A0A087WUL8 3843 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 TRAV8-2A0A0B4J237 113 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 NDUFA4O00483 81 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 SH2D1AO60880 128 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 IL17RELQ6ZVW7 336 aa8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 MRPL53Q96EL3 112 aaKnown RBP8.91□□□□□ -0.98
SCUBE2-208ENST00000524317 WFDC2Q14508 124 aa8.9□□□□□ -0.98
SCUBE2-208ENST00000524317 BOD1L2Q8IYS8 172 aa8.9□□□□□ -0.98
SCUBE2-208ENST00000524317 ZNF580Q9UK33 172 aa8.9□□□□□ -0.98
SCUBE2-208ENST00000524317 B5MCH6 92 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 FSHBP01225 129 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 SRD5A1P18405 259 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 RPL32P62910 135 aaKnown RBP8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 ERCC8Q13216 396 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 CENPEQ02224 2701 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 NAV2Q8IVL1 2488 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 A0A1B0GUT8 65 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 PRYO14603 147 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 ZNF80P51504 273 aaPredicted RBP8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
SCUBE2-208ENST00000524317 RBAKDNA6NC62 111 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 F5H697 171 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 ETDBQ3ZM63 59 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 Q6AWC8 147 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 TMSB15BA0A087X1C1 80 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 C9orf139Q6ZV77 190 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 SMIM20Q8N5G0 67 aa8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 MCRIP2Q9BUT9 160 aaKnown RBP8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.88□□□□□ -0.99
SCUBE2-208ENST00000524317 PSMB8P28062 276 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 SH2D6Q7Z4S9 175 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 Q96MF0 132 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 UFC1Q9Y3C8 167 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 ZNF469Q96JG9 3925 aaPredicted RBP8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 RIGQ13278 110 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
SCUBE2-208ENST00000524317 Q6YL49 198 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 GPHB5Q86YW7 130 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 AGPAT4-IT1Q9H0P7 198 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 ZANQ9Y493 2812 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 ABCA12Q86UK0 2595 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 ANKRD17O75179 2603 aaKnown RBP8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 ID1P41134 155 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 C10orf99Q6UWK7 81 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 GATD1Q8NB37 220 aa8.86□□□□□ -0.99
SCUBE2-208ENST00000524317 CSPG4Q6UVK1 2322 aa8.85□□□□□ -0.99
SCUBE2-208ENST00000524317 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
SCUBE2-208ENST00000524317 SYT8Q8NBV8 401 aa8.85□□□□□ -0.99
SCUBE2-208ENST00000524317 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
SCUBE2-208ENST00000524317 C20orf78Q9BR46 151 aa8.85□□□□□ -0.99
SCUBE2-208ENST00000524317 FABP5P3A8MUU1 101 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 SOCS3O14543 225 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 HOXA3O43365 443 aaPredicted RBP8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 ZNF138P52744 262 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 TMEM78Q5T7P6 136 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 C9orf47Q6ZRZ4 202 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 Q6ZUT4 128 aa8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 DAZ1Q9NQZ3 744 aaKnown RBP8.84□□□□□ -0.99
SCUBE2-208ENST00000524317 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
SCUBE2-208ENST00000524317 ZNF493Q6ZR52 646 aa8.83□□□□□ -1
SCUBE2-208ENST00000524317 RHPN1-AS1Q9BWJ2 59 aa8.83□□□□□ -1
SCUBE2-208ENST00000524317 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
SCUBE2-208ENST00000524317 TMEM213A2RRL7 107 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms