RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 TMEM101Q96IK0 257 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 C21orf62Q9NYP8 219 aa6.44□□□□□ -1.38
CSMD1-213ENST00000523488 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
CSMD1-213ENST00000523488 CCL3L1P16619 93 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 TCF15Q12870 199 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 TMEM170BQ5T4T1 132 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 IGF2-ASQ6U949 168 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 IGHV7-4-1A0A0J9YVY3 117 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 PMVKQ15126 192 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 MSMPQ1L6U9 139 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 EPM2AB3EWF7 344 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 IGKV1-17P01599 117 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 LGALS3P17931 250 aaKnown RBP6.43□□□□□ -1.38
CSMD1-213ENST00000523488 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 APRG1Q8IVJ8 170 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 RNF5Q99942 180 aa6.43□□□□□ -1.38
CSMD1-213ENST00000523488 IGLV4-69A0A075B6H9 119 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 ATP5G1P05496 136 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 CFC1BP0CG36 223 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 CFC1P0CG37 223 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 MED14OSP0DP75 135 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 CRIP2P52943 208 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 TNFAIP6P98066 277 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 LRRC75A-AS1Q8N1F1 130 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 SLC25A29Q8N8R3 303 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 TMEM263Q8WUH6 116 aaKnown RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 MRPL53Q96EL3 112 aaKnown RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 S4R3C0 116 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 A0A0J9YY99 117 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 F8W735 103 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 IGFL4Q6B9Z1 124 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 FAM236AA0A1B0GUQ0 79 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 FAM236BA0A1B0GV22 79 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 SMIM9A6NGZ8 99 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 J3KT08 172 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 M0R1B8 84 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 DUSP14O95147 198 aaKnown RBP6.42□□□□□ -1.38
CSMD1-213ENST00000523488 CRYGDP07320 174 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 COX6CP09669 75 aa6.42□□□□□ -1.38
CSMD1-213ENST00000523488 NPFFO15130 113 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 ZNF80P51504 273 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-213ENST00000523488 IGHV1-69DA0A0B4J2H0 117 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 LOC107984640A0A0U1RRK4 108 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 SMIM2Q9BVW6 85 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 TIMM23O14925 209 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 PAPPA-AS1Q5QFB9 102 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 TMEM200BQ69YZ2 307 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 C2orf66Q6UXQ4 117 aa6.41□□□□□ -1.38
CSMD1-213ENST00000523488 A4D1N5 150 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 TRGV3P03979 118 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 ZNF491Q8N8L2 437 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 NBEAQ8NFP9 2946 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 ZFYVE26Q68DK2 2539 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 LGALS9O00182 355 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 PRSS2P07478 247 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 MGPP08493 103 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 FAM19A4Q96LR4 140 aa6.4□□□□□ -1.38
CSMD1-213ENST00000523488 LY6LH3BQJ8 138 aa6.4□□□□□ -1.39
CSMD1-213ENST00000523488 K7EIM0 57 aa6.4□□□□□ -1.39
CSMD1-213ENST00000523488 S100A4P26447 101 aaKnown RBP6.4□□□□□ -1.39
CSMD1-213ENST00000523488 CTSZQ9UBR2 303 aa6.4□□□□□ -1.39
CSMD1-213ENST00000523488 CCDC168Q8NDH2 2452 aa6.4□□□□□ -1.39
CSMD1-213ENST00000523488 TRGV11A0A075B6L2 103 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV1-18A0A0C4DH31 117 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 C11orf86A6NJI1 115 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 OOSP1A8MZH6 123 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 CD3EP07766 207 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 HERVK_113P63121 156 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 DUX3Q96PT4 197 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 SPRR3Q9UBC9 169 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 C5orf38Q86SI9 138 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.39□□□□□ -1.39
CSMD1-213ENST00000523488 NDUFA7O95182 113 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 IGHV3-33P01772 117 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 FDCSPQ8NFU4 85 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 KAAG1Q9UBP8 84 aa6.39□□□□□ -1.39
CSMD1-213ENST00000523488 SETD2Q9BYW2 2564 aaPredicted RBP6.39□□□□□ -1.39
CSMD1-213ENST00000523488 TLN2Q9Y4G6 2542 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 NDUFB3O43676 98 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 CNTFRP26992 372 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 SUMO2P61956 95 aaKnown RBP6.38□□□□□ -1.39
CSMD1-213ENST00000523488 FAM19A5Q7Z5A7 132 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-213ENST00000523488 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 EDA2RQ9HAV5 297 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 DYNLRB1Q9NP97 96 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 SLC25A15Q9Y619 301 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 SMAD5-AS1Q9Y6J3 95 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 ANKHD1Q8IWZ3 2542 aaKnown RBP6.38□□□□□ -1.39
CSMD1-213ENST00000523488 CXCL5P42830 114 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 ADIPOQQ15848 244 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 Q6ZS46 218 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 C3orf22Q8N5N4 141 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 LITAFQ99732 161 aa6.38□□□□□ -1.39
CSMD1-213ENST00000523488 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
CSMD1-213ENST00000523488 H3BT86 120 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms